HHsearch alignment for GI: 254780419 and conserved domain: PRK09537
>PRK09537 pylS pyrolysyl-tRNA synthetase; Reviewed.
Probab=97.91 E-value=5.2e-06 Score=62.50 Aligned_cols=86 Identities=28% Similarity=0.507 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCCC-C--CC-C-------CCCCCCCCCHHHHHHCC--CCHHHHH---HHHHC-C
Q ss_conf 99999998752036514620332112464-5--66-4-------54322222103443112--3854564---43310-5
Q gi|254780419|r 146 TRIINSMRCRMIAENFIECSTPILTASSP-E--GA-R-------DFLVPSRVNQGSFYALP--QAPQQYK---QLLMA-S 208 (622)
Q Consensus 146 s~i~~~~R~~l~~~gF~EveTP~L~ksTp-e--GA-r-------dFlVPsR~~~g~fYALp--QSPQlyK---QlLmv-~ 208 (622)
T Consensus 210 gkler~it~ffvdrgfleikspilip~eyiermgid~d~elskQiF----rvd~n--~CLRPMLAPnLYnylrkL~R~lp 283 (420)
T PRK09537 210 GKLERDITKFFVDRGFLEIKSPILIPAEYIERMGIDNDTELSKQIF----RVDKN--FCLRPMLAPNLYNYLRKLDRALP 283 (420)
T ss_pred HHHHHHHHHHHHCCCCEEECCCEECCHHHHHHHCCCCHHHHHHHHE----EECCC--CCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 6778888998541451351485042199999857886056554516----74345--33241014269999999986168
Q ss_pred CHHHHEEEHHHHCCCCCCCCCCCCCEEEEE
Q ss_conf 702331100110377766553800003565
Q gi|254780419|r 209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLD 238 (622)
Q Consensus 209 G~dryfqiarcFRdEd~R~dRqp~EFTqlD 238 (622)
T Consensus 284 dPIrIFEIGpCyRKESdG~-~HLeEFTMlN 312 (420)
T PRK09537 284 DPIKIFEIGPCYRKESDGK-EHLEEFTMVN 312 (420)
T ss_pred CCEEEEEECCCCCCCCCCH-HHHHHHHHHH
T ss_conf 8715886204303444106-7887777776