HHsearch alignment for GI: 254780419 and conserved domain: PRK09537

>PRK09537 pylS pyrolysyl-tRNA synthetase; Reviewed.
Probab=97.91  E-value=5.2e-06  Score=62.50  Aligned_cols=86  Identities=28%  Similarity=0.507  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHCCCEEEEECCCCCCCCC-C--CC-C-------CCCCCCCCCHHHHHHCC--CCHHHHH---HHHHC-C
Q ss_conf             99999998752036514620332112464-5--66-4-------54322222103443112--3854564---43310-5
Q gi|254780419|r  146 TRIINSMRCRMIAENFIECSTPILTASSP-E--GA-R-------DFLVPSRVNQGSFYALP--QAPQQYK---QLLMA-S  208 (622)
Q Consensus       146 s~i~~~~R~~l~~~gF~EveTP~L~ksTp-e--GA-r-------dFlVPsR~~~g~fYALp--QSPQlyK---QlLmv-~  208 (622)
T Consensus       210 gkler~it~ffvdrgfleikspilip~eyiermgid~d~elskQiF----rvd~n--~CLRPMLAPnLYnylrkL~R~lp  283 (420)
T PRK09537        210 GKLERDITKFFVDRGFLEIKSPILIPAEYIERMGIDNDTELSKQIF----RVDKN--FCLRPMLAPNLYNYLRKLDRALP  283 (420)
T ss_pred             HHHHHHHHHHHHCCCCEEECCCEECCHHHHHHHCCCCHHHHHHHHE----EECCC--CCCCCCCCHHHHHHHHHHHHHCC
T ss_conf             6778888998541451351485042199999857886056554516----74345--33241014269999999986168


Q ss_pred             CHHHHEEEHHHHCCCCCCCCCCCCCEEEEE
Q ss_conf             702331100110377766553800003565
Q gi|254780419|r  209 GFDRYFQIAPCFRDEDPRSDRLPGEFYQLD  238 (622)
Q Consensus       209 G~dryfqiarcFRdEd~R~dRqp~EFTqlD  238 (622)
T Consensus       284 dPIrIFEIGpCyRKESdG~-~HLeEFTMlN  312 (420)
T PRK09537        284 DPIKIFEIGPCYRKESDGK-EHLEEFTMVN  312 (420)
T ss_pred             CCEEEEEECCCCCCCCCCH-HHHHHHHHHH
T ss_conf             8715886204303444106-7887777776