HHsearch alignment for GI: 254780419 and conserved domain: PRK12304

>PRK12304 thrS threonyl-tRNA synthetase; Reviewed.
Probab=96.74  E-value=0.0063  Score=40.43  Aligned_cols=112  Identities=17%  Similarity=0.227  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC---CCC----CC--CCCCCCCCHHHHHHC-----CCCHHHHHHHHHC
Q ss_conf             245899999998752036514620332112464---566----45--432222210344311-----2385456443310
Q gi|254780419|r  142 IVKRTRIINSMRCRMIAENFIECSTPILTASSP---EGA----RD--FLVPSRVNQGSFYAL-----PQAPQQYKQLLMA  207 (622)
Q Consensus       142 l~~Rs~i~~~~R~~l~~~gF~EveTP~L~ksTp---eGA----rd--FlVPsR~~~g~fYAL-----pQSPQlyKQlLmv  207 (622)
T Consensus       239 ~~i~~~le~~~r~~~~~~Gy~eV~TP~i~~~~Lw~~SGH~~~Y~e~Mf~~--~~-d~~~y~lKPMNCP~H~~if~~~~-r  314 (604)
T PRK12304        239 ARLRSKLEHLLYKAHRLRGYEPVRGPEILKSDVWKISGHYANYKENMYFT--TI-DEQEYGIKPMNCVGHIKVYQSDL-R  314 (604)
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHCCCHHHHHCCCCCEE--EC-CCCEEECCCCCCHHHHHHHHCCC-C
T ss_conf             49999999999999998299680386545588873055153210576445--05-77433036779574999986277-4


Q ss_pred             CC--H-HHHEEEHHHHCCCCCCCC----CCCCCEEEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf             57--0-233110011037776655----3800003565410268999999999999999
Q gi|254780419|r  208 SG--F-DRYFQIAPCFRDEDPRSD----RLPGEFYQLDMEMSFVEQDDILNTMENVLRG  259 (622)
Q Consensus       208 ~G--~-dryfqiarcFRdEd~R~d----Rqp~EFTqlD~EmsF~~~edvm~l~E~li~~  259 (622)
T Consensus       315 SYRdLPlR~aEfg~~hR~E~SG~L~GL~RvR-~FtqDDaH-IFc~~dQi~~Ei~~~l~~  371 (604)
T PRK12304        315 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVR-EFTQDDAH-IFCMPSQIKEEVLEILDF  371 (604)
T ss_pred             CHHHCCHHHHHCCCEECCCCCCCCCCCCCCC-CCCCCCCE-EECCHHHHHHHHHHHHHH
T ss_conf             4443555545435320267776634645577-89778844-654899999999999999