HHsearch alignment for GI: 254780419 and conserved domain: PRK12304
>PRK12304 thrS threonyl-tRNA synthetase; Reviewed.
Probab=96.74 E-value=0.0063 Score=40.43 Aligned_cols=112 Identities=17% Similarity=0.227 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC---CCC----CC--CCCCCCCCHHHHHHC-----CCCHHHHHHHHHC
Q ss_conf 245899999998752036514620332112464---566----45--432222210344311-----2385456443310
Q gi|254780419|r 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSP---EGA----RD--FLVPSRVNQGSFYAL-----PQAPQQYKQLLMA 207 (622)
Q Consensus 142 l~~Rs~i~~~~R~~l~~~gF~EveTP~L~ksTp---eGA----rd--FlVPsR~~~g~fYAL-----pQSPQlyKQlLmv 207 (622)
T Consensus 239 ~~i~~~le~~~r~~~~~~Gy~eV~TP~i~~~~Lw~~SGH~~~Y~e~Mf~~--~~-d~~~y~lKPMNCP~H~~if~~~~-r 314 (604)
T PRK12304 239 ARLRSKLEHLLYKAHRLRGYEPVRGPEILKSDVWKISGHYANYKENMYFT--TI-DEQEYGIKPMNCVGHIKVYQSDL-R 314 (604)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHCCCHHHHHCCCCCEE--EC-CCCEEECCCCCCHHHHHHHHCCC-C
T ss_conf 49999999999999998299680386545588873055153210576445--05-77433036779574999986277-4
Q ss_pred CC--H-HHHEEEHHHHCCCCCCCC----CCCCCEEEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 57--0-233110011037776655----3800003565410268999999999999999
Q gi|254780419|r 208 SG--F-DRYFQIAPCFRDEDPRSD----RLPGEFYQLDMEMSFVEQDDILNTMENVLRG 259 (622)
Q Consensus 208 ~G--~-dryfqiarcFRdEd~R~d----Rqp~EFTqlD~EmsF~~~edvm~l~E~li~~ 259 (622)
T Consensus 315 SYRdLPlR~aEfg~~hR~E~SG~L~GL~RvR-~FtqDDaH-IFc~~dQi~~Ei~~~l~~ 371 (604)
T PRK12304 315 SYRDLPLKFFEYGVVHRHEKSGVLHGLFRVR-EFTQDDAH-IFCMPSQIKEEVLEILDF 371 (604)
T ss_pred CHHHCCHHHHHCCCEECCCCCCCCCCCCCCC-CCCCCCCE-EECCHHHHHHHHHHHHHH
T ss_conf 4443555545435320267776634645577-89778844-654899999999999999