HHsearch alignment for GI: 254780419 and conserved domain: PRK12305

>PRK12305 thrS threonyl-tRNA synthetase; Reviewed.
Probab=97.27  E-value=0.0013  Score=45.23  Aligned_cols=111  Identities=17%  Similarity=0.212  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC---CCCCC-----CCCCCCCCHHHHHHC-----CCCHHHH-------
Q ss_conf             245899999998752036514620332112464---56645-----432222210344311-----2385456-------
Q gi|254780419|r  142 IVKRTRIINSMRCRMIAENFIECSTPILTASSP---EGARD-----FLVPSRVNQGSFYAL-----PQAPQQY-------  201 (622)
Q Consensus       142 l~~Rs~i~~~~R~~l~~~gF~EveTP~L~ksTp---eGArd-----FlVPsR~~~g~fYAL-----pQSPQly-------  201 (622)
T Consensus       208 ~~i~~~le~~~r~~~~~~Gy~eV~TP~i~~~~Lw~~SGH~~~Y~e~Mf~~~~-~~~e~~~lKPMNCP~H~~if~~~~rSY  286 (576)
T PRK12305        208 MIIKNAIRKFILELDRKYGFDEVLTPHFGEKKLYKTSGHLDHYKDDMFKPLK-IENEELIPRPMTCPHHIILYSNELRSY  286 (576)
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCHHHHHHHCCCCEE-CCCCEEEECCCCCHHHHHHHHCCCCCH
T ss_conf             8999999999999999869989846421428899766646556642573063-156416535778632677764277544


Q ss_pred             HHHHHCCCHHHHEEEHHHHCCCCCCCC----CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf             443310570233110011037776655----38000035654102689999999999999999
Q gi|254780419|r  202 KQLLMASGFDRYFQIAPCFRDEDPRSD----RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV  260 (622)
Q Consensus       202 KQlLmv~G~dryfqiarcFRdEd~R~d----Rqp~EFTqlD~EmsF~~~edvm~l~E~li~~i  260 (622)
T Consensus       287 RdLPl-----R~aEfg~~~R~E~SG~L~GL~RvR-~FtqDDAH-IFct~dQi~~Ei~~~l~~i  342 (576)
T PRK12305        287 RDLPI-----RLSEQSRLYRYEKSGALTGLERVR-AMDLTEGH-IFVRKDQIESEVKHLFKMI  342 (576)
T ss_pred             HHCCH-----HHHCCCCEECCCCCCCCCCCCCCC-CCCCCCCC-EEECHHHHHHHHHHHHHHH
T ss_conf             43242-----200044354478886555755466-88768712-1208999999999999999