HHsearch alignment for GI: 254780419 and conserved domain: PRK12305
>PRK12305 thrS threonyl-tRNA synthetase; Reviewed.
Probab=97.27 E-value=0.0013 Score=45.23 Aligned_cols=111 Identities=17% Similarity=0.212 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC---CCCCC-----CCCCCCCCHHHHHHC-----CCCHHHH-------
Q ss_conf 245899999998752036514620332112464---56645-----432222210344311-----2385456-------
Q gi|254780419|r 142 IVKRTRIINSMRCRMIAENFIECSTPILTASSP---EGARD-----FLVPSRVNQGSFYAL-----PQAPQQY------- 201 (622)
Q Consensus 142 l~~Rs~i~~~~R~~l~~~gF~EveTP~L~ksTp---eGArd-----FlVPsR~~~g~fYAL-----pQSPQly------- 201 (622)
T Consensus 208 ~~i~~~le~~~r~~~~~~Gy~eV~TP~i~~~~Lw~~SGH~~~Y~e~Mf~~~~-~~~e~~~lKPMNCP~H~~if~~~~rSY 286 (576)
T PRK12305 208 MIIKNAIRKFILELDRKYGFDEVLTPHFGEKKLYKTSGHLDHYKDDMFKPLK-IENEELIPRPMTCPHHIILYSNELRSY 286 (576)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCHHHHHHHCCCCEE-CCCCEEEECCCCCHHHHHHHHCCCCCH
T ss_conf 8999999999999999869989846421428899766646556642573063-156416535778632677764277544
Q ss_pred HHHHHCCCHHHHEEEHHHHCCCCCCCC----CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 443310570233110011037776655----38000035654102689999999999999999
Q gi|254780419|r 202 KQLLMASGFDRYFQIAPCFRDEDPRSD----RLPGEFYQLDMEMSFVEQDDILNTMENVLRGV 260 (622)
Q Consensus 202 KQlLmv~G~dryfqiarcFRdEd~R~d----Rqp~EFTqlD~EmsF~~~edvm~l~E~li~~i 260 (622)
T Consensus 287 RdLPl-----R~aEfg~~~R~E~SG~L~GL~RvR-~FtqDDAH-IFct~dQi~~Ei~~~l~~i 342 (576)
T PRK12305 287 RDLPI-----RLSEQSRLYRYEKSGALTGLERVR-AMDLTEGH-IFVRKDQIESEVKHLFKMI 342 (576)
T ss_pred HHCCH-----HHHCCCCEECCCCCCCCCCCCCCC-CCCCCCCC-EEECHHHHHHHHHHHHHHH
T ss_conf 43242-----200044354478886555755466-88768712-1208999999999999999