HHsearch alignment for GI: 254780419 and conserved domain: PRK12820

>PRK12820 bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA amidotransferase subunit C; Provisional.
Probab=100.00  E-value=0  Score=1546.63  Aligned_cols=599  Identities=37%  Similarity=0.646  Sum_probs=555.2

Q ss_pred             CCHHHCCHHHCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCC---HHHHHHHCCCCCCEEEEEEEEEECCCC
Q ss_conf             20423697998988999979800444698799999779825999974881---578998528988589999999975865
Q gi|254780419|r    7 HSCGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDS---ACFEIAKSVRSEWVLCIDGLVMSRSAE   83 (622)
Q Consensus         7 h~cg~l~~~~~g~~V~i~GwV~~~R~~g~l~F~~lrD~sG~~Q~v~~~~~---~~~~~~~~l~~esvv~v~G~V~~r~~~   83 (622)
T Consensus         7 ~ycg~l~~~~vG~~V~l~GWV~~~R~~G~l~FidLRD~~G~vQvv~~~~~~~~d~~~~~~~l~~E~vI~V~G~V~~r~~~   86 (706)
T PRK12820          7 SFCGHLSLDDTGREVCLAGWVDAFRDHGELLFIHLRDRNGFIQAVFSPEAAPADVYELAASLRAEFCVALQGEVQKRLEE   86 (706)
T ss_pred             CCCCCCCHHHCCCEEEEEEEEEEEECCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEEECCCC
T ss_conf             45134994889998999786878966898499999728945899986886888899998539986789999899934765


Q ss_pred             CCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCC-----------CCCHHHHCCCCCEEECCCCCCCCHHHHHHHHHHH
Q ss_conf             55887778659999889999502117998645766-----------7898782112320001211112124589999999
Q gi|254780419|r   84 TINANIITGQIELSAQKIEILSVAEELPLPVFGER-----------EYPESIRFKYRFLDLRRDTLHKNIVKRTRIINSM  152 (622)
Q Consensus        84 ~~n~~~~tG~~Ei~~~~~~il~~a~~~P~~~~~~~-----------~~~e~~rl~~R~LdLR~~~~~~~l~~Rs~i~~~~  152 (622)
T Consensus        87 ~~n~~~~tGeiEI~v~~l~iLs~a~~lPf~i~~~~~~~~~~~~~~~~~~ee~RLkyRyLDLRr~~~~~~~~~Rskv~~~i  166 (706)
T PRK12820         87 TENPHIETGDIEVFVRELSILAASEALPFAISDKAMTAGAGSAGADAVNEDLRLQYRYLDIRRPAMQDHLAKRHRIIKCA  166 (706)
T ss_pred             CCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             66888988618999769999877889998856333433344444456678887665677647998999999999999999


Q ss_pred             HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHEEEHHHHCCCCCCCCCCCC
Q ss_conf             87520365146203321124645664543222221034431123854564433105702331100110377766553800
Q gi|254780419|r  153 RCRMIAENFIECSTPILTASSPEGARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPG  232 (622)
Q Consensus       153 R~~l~~~gF~EveTP~L~ksTpeGArdFlVPsR~~~g~fYALpQSPQlyKQlLmv~G~dryfqiarcFRdEd~R~dRqp~  232 (622)
T Consensus       167 R~~l~~~gF~EVETP~L~~stpEGArdflvPsr~~~~~fyaLpQSPQlyKQlLMvgG~dRyFqIarcFRdEd~r~dRqP-  245 (706)
T PRK12820        167 RDFLDSRGFLEIETPILTKSTPEGARDYLVPSRIHPKEFYALPQSPQLFKQLLMIAGFERYFQLARCFRDEDLRPNRQP-  245 (706)
T ss_pred             HHHHHHCCCEEEECCEECCCCCCCCCCCCCCEECCCCCEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCC-
T ss_conf             9999877988966870445675324575002445887650056682999999986286617996001128999988798-


Q ss_pred             CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             00356541026899999999999999999998087234577321218988751367776444764012443101787524
Q gi|254780419|r  233 EFYQLDMEMSFVEQDDILNTMENVLRGVFEEFSNGNTVSNNFLRICYDDAIRRYGTDKPDLRNPIIMHNVTEHFVHSEFR  312 (622)
Q Consensus       233 EFTqlD~EmsF~~~edvm~l~E~li~~i~~~v~~~~~i~~pF~rmtY~eAm~~YGsDKPDLR~~lei~dit~~~~~~~f~  312 (622)
T Consensus       246 EFTqlDiEmSF~d~edvm~l~E~li~~~~~-~~-~~~l~~pFprmtY~eAm~~YGsDKPDlRf~lel~d~t~if~~~~f~  323 (706)
T PRK12820        246 EFTQLDIEASFIDEEFIFELIEELTARMFA-IG-GIALPRPFPRMPYAEAMDTTGSDRPDLRFDLKFADATDIFENTRYG  323 (706)
T ss_pred             CEEEEEEEHHCCCHHHHHHHHHHHHHHHHH-HC-CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCHHHCCCCCH
T ss_conf             340687421348999999999999999998-53-8454687453419999998689874310230102330122155405


Q ss_pred             HHHHHHHCCCCCEEEEEECCC--CCCCCCCH--HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHCCHHHHHHHH
Q ss_conf             566687403784799996278--76652103--56779998764202462355204777533357025532527899999
Q gi|254780419|r  313 VFSKILSVNPGYEVWAIPAKG--GGGNRAFC--DRMNEWARSQGQPGLAYIFWRLDESGNVAGMGPVAKHLNIVNTEAIR  388 (622)
Q Consensus       313 vf~~~~~~~~~~~v~~i~~~~--~~~srk~~--D~l~e~ak~~g~kgL~~i~~~~~~~~~~~~~spi~K~l~~~~~~~l~  388 (622)
T Consensus       324 vF~~~l~~gg--~Vk~I~v~~~~~~~s~~~i~~e~~~eia~~~gakGl~w~k~~~---~--~l~~~i~kf~see~~~~l~  396 (706)
T PRK12820        324 IFKQILQRGG--RIKGINIKGQSEKLSKNVLQNEYAKEIAPSFGAKGMTWMRAEA---G--GLDSNIVQFFSADEKEALK  396 (706)
T ss_pred             HHHHHHHHCC--EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC---C--CCCCHHHHCCCHHHHHHHH
T ss_conf             8999885088--6889976883566566665669999862430656625898616---8--6463144307999999999


Q ss_pred             HHHCCCCCCCEEEEECCC-CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEECCCCCCCCHHHCCCCCCCCCHH
Q ss_conf             981887557269980885-4110013478899987730035575102889607705354554700021100247664306
Q gi|254780419|r  389 VRLDMQDGDSCFFIAGDP-LKFCSFAADARNHIAQELGIINCNCFEFCWIMDFPFYEWNEEEKKIDFAHNPFTMPQGGME  467 (622)
Q Consensus       389 ~~~~~~~GD~i~f~a~~~-~~~~~~lg~lR~~ia~~l~li~~~~~~flWV~DFPLFe~dee~~r~~s~HHPFTaP~~~~~  467 (622)
T Consensus       397 ~~~~~~~GD~i~~~ad~~~~~v~~~LG~lR~~la~~l~Li~~~~~~flWVtDFPLFE~~ee~-~~~s~HHPFT~P~~ed~  475 (706)
T PRK12820        397 RRFHAEDGDVIIMIADASCAIVLSALGQLRLHLADRLGLIPEGVFHPLWITDFPLFEATDDG-GVTSSHHPFTAPDREDF  475 (706)
T ss_pred             HHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCC
T ss_conf             98487889889997275066899886267899999848878786316885167422345444-65335489778882336


Q ss_pred             HHHC-CCHHHHHHHCCCEEECCEEECCCCEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHH
Q ss_conf             5541-887774131367777567721251231569999999998599989998667789999860849734222468999
Q gi|254780419|r  468 SLKG-NDLLSIKAFQYDLVCNGFEIASGGIRNHMSEVMLQAFSNVGISKEVVENRFGGLYRAFQCGMPPHGGIAAGIDRI  546 (622)
Q Consensus       468 ~l~~-~dp~~v~a~~YDLVlNG~EiggGSiRIHd~~iQ~~~f~~lgl~~ee~~~~Fg~lL~Al~yG~PPHgG~alGlDRl  546 (622)
T Consensus       476 d~~~~~~~~~v~a~aYDLVlNG~ElggGSiRIHd~~iQ~~if~~lGl~~ee~~~kFgf~LeAf~YGaPPHGGialGlDRL  555 (706)
T PRK12820        476 DPGDIEELLDLRSRAYDLVVNGEELGGGSIRINDKDIQLRIFAALGLSEEDIEDKFGFFLRAFDFAAPPHGGIALGLDRV  555 (706)
T ss_pred             CCCCCCCCCHHHCCEEEEEECCEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHH
T ss_conf             83224553200036460689999961402203899999999997599978988899999999866999867031039999


Q ss_pred             HHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCHHHHHCCCHHH-HHHHCCCEEE
Q ss_conf             999837398403213789998710346886728988998708356057301000000135-5542272576
Q gi|254780419|r  547 VMLLLGAKNVREVSLFPMSQNFCDLLMGSPSTVSVEQLRELGLRIVENPKKILKISVTTI-LRNVYGLKII  616 (622)
Q Consensus       547 vmll~g~~sIRdVIaFPKt~~g~Dlm~~aPs~v~~~qL~e~~i~~~~~~k~~~~~~~~~~-~~~~~~~~~~  616 (622)
T Consensus       556 vMlLtg~~sIRDVIaFPKt~~g~dlm~~aPs~v~~~QL~El~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  626 (706)
T PRK12820        556 VSMILQTPSIREVIAFPKNRSAACPLTGAPSEVAQEQLAELGLLDLGDADQLPGDAEKEDLIDHLSWVSRI  626 (706)
T ss_pred             HHHHCCCCCHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             99976998265052278998878600279886899999763774247755466655503457788888752