RPSBLAST alignment for GI: 254780419 and conserved domain: TIGR00499
>gnl|CDD|129590 TIGR00499, lysS_bact, lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial. This model represents the lysyl-tRNA synthetases that are class II amino-acyl tRNA synthetases. It includes all eukaryotic and most bacterial examples of the enzyme, but not archaeal or spirochete forms. Length = 496
Score = 81.3 bits (201), Expect = 8e-16
Identities = 67/304 (22%), Positives = 128/304 (42%), Gaps = 39/304 (12%)
Query: 9 CGDLGVSDVGSFVRLSGWVHRVRPHGGIIFLDIRDHYGITQVVANPDSACFEIAKSVRSE 68
+ + D V ++G + R G F+ ++D G Q+ N D + +
Sbjct: 44 LSNEELEDKNIEVSIAGRIMARRSMGKATFITLQDESGQIQLYVNKDDLPEDFYEFDEYL 103
Query: 69 W----VLCIDGLVMSRSAETINANIITGQIELSAQKIEIL-SVAEELPLPVFGEREYPES 123
++ + G TG++ + +++IL LP G + E+
Sbjct: 104 LDLGDIIGVTGYPFKTK---------TGELSVHVTELQILTKALRPLPDKFHGLTD-QET 153
Query: 124 IRFKYRFLDL-----RRDTLHKNIVKRTRIINSMRCRMIAENFIECSTPILTASSPEG-- 176
R++ R+LDL R T + R++II ++R + FIE TP+L P G
Sbjct: 154 -RYRQRYLDLIVNPDSRQTF----LVRSKIIKAIRRFLDDRGFIEVETPMLQ-VIPGGAN 207
Query: 177 ARDFLVPSRVNQGSFYALPQAPQQYKQLLMASGFDRYFQIAPCFRDEDPRSDRLPGEFYQ 236
AR F+ Y L AP+ Y + L+ GF++ ++I FR+E + P EF
Sbjct: 208 ARPFITHHNALDMDLY-LRIAPELYLKRLIVGGFEKVYEIGRNFRNEGVDTTHNP-EFTM 265
Query: 237 LDMEMSFVEQDDILNTMENVLRGVFEEFS-----NGNTVSNNFL----RICYDDAIRRYG 287
++ ++ + +D+++ EN+ + + +E + +F RI +AI++Y
Sbjct: 266 IEFYQAYADYEDLMDLTENLFKFLAQELLGTTKITYGELEIDFKKPFKRITMVEAIKKYD 325
Query: 288 TDKP 291
+
Sbjct: 326 METG 329