HHsearch alignment for GI: 254780420 and conserved domain: CHL00188
>CHL00188 hisH imidazole glycerol phosphate synthase subunit hisH; Provisional.
Probab=99.68 E-value=5.9e-16 Score=132.99 Aligned_cols=163 Identities=24% Similarity=0.361 Sum_probs=101.2
Q ss_pred CEEEEEECCC--CCHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCEEEECCCCCCCC--CC-C----CCCHHHHHHHCCC
Q ss_conf 1499996796--410232222202454133046574464413578899858888841--01-1----2110122210257
Q gi|254780420|r 206 YHVVCIDYGI--RSNLLRVLSSLGCRITIVGAETSYKDIMSLQPDGVLLSNGPGDPA--VT-S----VYSSPIICKLVDS 276 (396)
Q Consensus 206 ~kIvvIDfGi--K~nIlr~L~~~g~~v~Vvp~~~~~~~i~~~~pdgi~lSnGPGdP~--~~-~----~~~~~~~~~~~~~ 276 (396)
T Consensus 2 ~~I~Iid~g~GNi~Sv~~al~~~g~~~~ii---~~~~~i~--~~d~lIL---PGVGsf~~~m~~L~~~~l~~~i~~~~~~ 73 (210)
T CHL00188 2 MKIGIIDYSMGNLHSVSRAIQQAGQQPCII---NSESELA--QVHALVL---PGVGSFDLAMKKLEKKGLITPIKKWIAE 73 (210)
T ss_pred CEEEEEECCCHHHHHHHHHHHHCCCCEEEE---CCHHHHH--HCCEEEE---CCCCCHHHHHHHHHHCCCHHHHHHHHHC
T ss_conf 779999588478999999999869987997---9999996--4896898---8867389999988630516999999976
Q ss_pred CCCEEEEECHHHHHHHHC-----------CCCCCCCC------CCCCCCCCCCEECC-----------------CCEEEE
Q ss_conf 863478610058878752-----------85446677------67521011234778-----------------970999
Q gi|254780420|r 277 GMPMFGICLGHQLLGLAL-----------GAQTVKMY------QGHHGVNHPVKNIS-----------------NGTVEI 322 (396)
Q Consensus 277 ~iPilGIClGhQ~l~~a~-----------G~~~~kl~------~GhrG~N~Pv~~~~-----------------t~kv~i 322 (396)
T Consensus 74 g~piLGICLGmQlLf~~seEg~~~GLgli~G~v~k~~~~~~~kvPh~GWn~-i~-~~~~~~~~~~~~~~~~~~~~~~~YF 151 (210)
T CHL00188 74 GNPFIGICLGLHLLFETSEEGKEEGLGIYKGQVKRLKHSPVKVIPHMGWNR-LE-CQNSECQNSEWVNWKAWPLNPWAYF 151 (210)
T ss_pred CCCEEEEEHHEEEEEHHCCCCCCCCCCEECCEEEECCCCCCCCCCCCCHHH-EE-CCCCCCCCCCCCHHHCCCCCCCEEE
T ss_conf 998699842102210221156767734566689993788664673205423-24-4576433444511215776770799
Q ss_pred ECCCCCEEEEHHHCCCCCEEEEEECCC-CEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 614576157034369982899998899-80872686799778983487887767001689999999
Q gi|254780420|r 323 VSMNHGFAIDASSLPAGLEETHISLFD-SSNCGFRLIDQPVFSVQYHPESSPGPQDSYYLFSTFID 387 (396)
Q Consensus 323 TsqNHg~~v~~~slp~~~~v~~~~~nD-~tiegi~~~~~~~~~vQfHPEa~PGP~D~~~~F~~F~~ 387 (396)
T Consensus 152 v---HSY~~~~~~--~~~~~~~~~yg~~~~~a~v~--k~Ni~G~QFHPEKS~--~~Gl~lL~nFl~ 208 (210)
T CHL00188 152 V---HSYGVMPKS--QACATTTTFYGKQQMVAAIE--YDNIFAMQFHPEKSG--EFGLWLLREFMK 208 (210)
T ss_pred E---EEEEECCCC--CCEEEEEEEECCEEEEEEEE--ECCEEEEECCCCCCC--HHHHHHHHHHHH
T ss_conf 7---413552798--43799999639989999997--199999948800076--879999999975