HHsearch alignment for GI: 254780420 and conserved domain: COG0118
>COG0118 HisH Glutamine amidotransferase [Amino acid transport and metabolism].
Probab=99.66 E-value=3.1e-15 Score=127.90 Aligned_cols=168 Identities=26% Similarity=0.450 Sum_probs=104.1
Q ss_pred CEEEEEECCCC--CHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCEEEECCCCCCCCCCCC-----CCHHHHHHHCCCCC
Q ss_conf 14999967964--102322222024541330465744644135788998588888410112-----11012221025786
Q gi|254780420|r 206 YHVVCIDYGIR--SNLLRVLSSLGCRITIVGAETSYKDIMSLQPDGVLLSNGPGDPAVTSV-----YSSPIICKLVDSGM 278 (396)
Q Consensus 206 ~kIvvIDfGiK--~nIlr~L~~~g~~v~Vvp~~~~~~~i~~~~pdgi~lSnGPGdP~~~~~-----~~~~~~~~~~~~~i 278 (396)
T Consensus 2 ~~i~IIDyg~GNL~Sv~~Aler~G~~~~vs---~d~~~i~--~AD~liL-PGVGaf~~am~~L~~~gl~~~i~~~~~~~k 75 (204)
T COG0118 2 MMVAIIDYGSGNLRSVKKALERLGAEVVVS---RDPEEIL--KADKLIL-PGVGAFGAAMANLRERGLIEAIKEAVESGK 75 (204)
T ss_pred CEEEEEECCCCHHHHHHHHHHHCCCEEEEE---CCHHHHH--HCCEEEE-CCCCCHHHHHHHHHHCCHHHHHHHHHHCCC
T ss_conf 789999728635999999999759806981---6988971--0888786-697888999998886366999999975599
Q ss_pred CEEEEECHHHHHHHHC-------C-----CCCCC-----CCCCCCCCCC-------CCEE-CCC-CEEEEECCCCCEEEE
Q ss_conf 3478610058878752-------8-----54466-----7767521011-------2347-789-709996145761570
Q gi|254780420|r 279 PMFGICLGHQLLGLAL-------G-----AQTVK-----MYQGHHGVNH-------PVKN-ISN-GTVEIVSMNHGFAID 332 (396)
Q Consensus 279 PilGIClGhQ~l~~a~-------G-----~~~~k-----l~~GhrG~N~-------Pv~~-~~t-~kv~iTsqNHg~~v~ 332 (396)
T Consensus 76 P~LGIClGMQlLfe~SeE~~~~~GLg~i~G~V~r~~~~~~kvPHMGWN~l~~~~~~~l~~gi~~~~~~YFV---HSY~~~ 152 (204)
T COG0118 76 PFLGICLGMQLLFERSEEGGGVKGLGLIPGKVVRFPAEDLKVPHMGWNQVEFVRGHPLFKGIPDGAYFYFV---HSYYVP 152 (204)
T ss_pred CEEEEEHHHHHHHHCCCCCCCCCCCCEECCEEEECCCCCCCCCCCCCCEEECCCCCHHHCCCCCCCEEEEE---EEEEEC
T ss_conf 77998175777664154368988702130168876888887886665223126787443289988779999---787615
Q ss_pred HHHCCCCCEEEEEECCCC-EEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 343699828999988998-087268679977898348788776700168999999999
Q gi|254780420|r 333 ASSLPAGLEETHISLFDS-SNCGFRLIDQPVFSVQYHPESSPGPQDSYYLFSTFIDFM 389 (396)
Q Consensus 333 ~~slp~~~~v~~~~~nD~-tiegi~~~~~~~~~vQfHPEa~PGP~D~~~~F~~F~~~i 389 (396)
T Consensus 153 ~--~~~~~v~~~~~-YG~~f~AaV~--k~N~~g~QFHPEKSg--~~Gl~lL~NFl~~~ 203 (204)
T COG0118 153 P--GNPETVVATTD-YGEPFPAAVA--KDNVFGTQFHPEKSG--KAGLKLLKNFLEWI 203 (204)
T ss_pred C--CCCCEEEEECC-CCCEEEEEEE--ECCEEEEECCCCCCH--HHHHHHHHHHHHHC
T ss_conf 7--99861888646-8983589997--088999923863113--87899999998444