HHsearch alignment for GI: 254780420 and conserved domain: cd01748
>cd01748 GATase1_IGP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS). Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS). IGPS incorporates ammonia derived from glutamine into N1-[(5'-phosphoribulosyl)-formimino]-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to form 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR) and imidazole glycerol phosphate (IGP). The glutamine amidotransferase domain generates the ammonia nucleophile which is channeled from the glutaminase active site to the PRFAR active site. IGPS belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.
Probab=99.86 E-value=3e-21 Score=170.29 Aligned_cols=164 Identities=25% Similarity=0.416 Sum_probs=106.0
Q ss_pred EEEEECCCCC--HHHHHHHHHCCCCEEEECCCCHHHHHHCCCCEEEECCCCCCCCCCCC-----CCHHHHHHHCCCCCCE
Q ss_conf 9999679641--02322222024541330465744644135788998588888410112-----1101222102578634
Q gi|254780420|r 208 VVCIDYGIRS--NLLRVLSSLGCRITIVGAETSYKDIMSLQPDGVLLSNGPGDPAVTSV-----YSSPIICKLVDSGMPM 280 (396)
Q Consensus 208 IvvIDfGiK~--nIlr~L~~~g~~v~Vvp~~~~~~~i~~~~pdgi~lSnGPGdP~~~~~-----~~~~~~~~~~~~~iPi 280 (396)
T Consensus 1 I~IiD~G~~ni~si~~~l~~lg~~~~ii~---~~~~l~--~~d~iIl-PGvG~f~~~~~~l~~~~~~~~i~~~~~~~~Pi 74 (198)
T cd01748 1 IAIIDYGMGNLRSVANALERLGAEVIITS---DPEEIL--SADKLIL-PGVGAFGDAMANLRERGLIEALKEAIASGKPF 74 (198)
T ss_pred CEEEECCCCHHHHHHHHHHHCCCCEEEEC---CHHHHH--HCCEEEE-CCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCE
T ss_conf 99997697789999999998799299979---999983--0898998-78874034444410038199999998769968
Q ss_pred EEEECHHHHHHHH------------CCCCCCCCCCC------CCCCCC-------CC-EECC-CCEEEEECCCCCEEEEH
Q ss_conf 7861005887875------------28544667767------521011-------23-4778-97099961457615703
Q gi|254780420|r 281 FGICLGHQLLGLA------------LGAQTVKMYQG------HHGVNH-------PV-KNIS-NGTVEIVSMNHGFAIDA 333 (396)
Q Consensus 281 lGIClGhQ~l~~a------------~G~~~~kl~~G------hrG~N~-------Pv-~~~~-t~kv~iTsqNHg~~v~~ 333 (396)
T Consensus 75 LGIClG~QlL~~~s~E~~~~~gLg~~~g~V~~~~~~~~~~iP~iGwn~i~~~~~~~~~~~~~~~~~~yF---~HS~~v~~ 151 (198)
T cd01748 75 LGICLGMQLLFESSEEGGGTKGLGLIPGKVVRFPASEGLKVPHMGWNQLEITKESPLFKGIPDGSYFYF---VHSYYAPP 151 (198)
T ss_pred EEEEEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCEEEE---EECCEEEC
T ss_conf 999811454666765068635536554099988777788664112246750336803207776753588---62417752
Q ss_pred HHCCCCCEEEEEECCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHH
Q ss_conf 43699828999988998087268679977898348788776700168999999
Q gi|254780420|r 334 SSLPAGLEETHISLFDSSNCGFRLIDQPVFSVQYHPESSPGPQDSYYLFSTFI 386 (396)
Q Consensus 334 ~slp~~~~v~~~~~nD~tiegi~~~~~~~~~vQfHPEa~PGP~D~~~~F~~F~ 386 (396)
T Consensus 152 ---~~~~~~~a~~~~~~~~~a~-i~~~ni~GvQFHPEkS-~~-~G~~ll~nFl 198 (198)
T cd01748 152 ---DDPDYILATTDYGGKFPAA-VEKDNIFGTQFHPEKS-GK-AGLKLLKNFL 198 (198)
T ss_pred ---CCCCEEEEEECCCCEEEEE-EECCCEEEEECCCCCC-CH-HHHHHHHHHC
T ss_conf ---8975068897599839999-9879999997898524-76-0899999539