HHsearch alignment for GI: 254780420 and conserved domain: cd03169
>cd03169 GATase1_PfpI_1 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.
Probab=96.72 E-value=0.0024 Score=44.27 Aligned_cols=60 Identities=18% Similarity=0.390 Sum_probs=46.6
Q ss_pred EECCCCHHHHHHCCCCEEEECCCCCCCCCC--CCCCHHHHHHHCCCCCCEEEEECHHHHHHHH
Q ss_conf 304657446441357889985888884101--1211012221025786347861005887875
Q gi|254780420|r 233 VGAETSYKDIMSLQPDGVLLSNGPGDPAVT--SVYSSPIICKLVDSGMPMFGICLGHQLLGLA 293 (396)
Q Consensus 233 vp~~~~~~~i~~~~pdgi~lSnGPGdP~~~--~~~~~~~~~~~~~~~iPilGIClGhQ~l~~a 293 (396)
T Consensus 63 ~~~~~~~~dv~~~~yDai~iPGG~g-~~~l~~d~~~~~li~~~~~~gK~iaaIChgp~~L~~a 124 (180)
T cd03169 63 FAVTADFDEVDPDDYDALVIPGGRA-PEYLRLDEKVLAIVRHFAEANKPVAAICHGPQILAAA 124 (180)
T ss_pred EECCCCHHHCCHHHCCEEEECCCCC-HHHHHCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHC
T ss_conf 4267876789861099999899822-8777119799999999998199699778168999876