HHsearch alignment for GI: 254780421 and conserved domain: COG2976
>COG2976 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=98.38 E-value=0.00013 Score=46.85 Aligned_cols=159 Identities=13% Similarity=0.066 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 89999999975199999999999999999999999999999999999999998413876669999999731255206999
Q gi|254780421|r 11 KGKCKMGKCCYKWIAPLLILMILSLAIWFYLFDGSHEKKKNIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLYNPL 90 (218)
Q Consensus 11 ~~~~~~~~~~yk~ii~~~i~~i~~~~~~~~~~~~~q~~~~~~as~~y~~al~~~~~~~~~~A~~~l~~l~~~~~~~ya~l 90 (218)
T Consensus 8 ~qql~~ik~wwkeNGk~li~gviLg~~~lfGW~ywq~~q~~q~~~AS~~---------Y~~~i~~~~------------- 65 (207)
T COG2976 8 QQQLEAIKDWWKENGKALIVGVILGLGGLFGWRYWQSHQVEQAQEASAQ---------YQNAIKAVQ------------- 65 (207)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHH-------------
T ss_conf 9999999999997790789999999999998899999878888899999---------999999985-------------
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC--CCCCHHHHHHHHHH
Q ss_conf 9999999995110057789999998731268957899999999996302699899999975311--46423568999999
Q gi|254780421|r 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLS--EPSNPMHQFANEIL 168 (218)
Q Consensus 91 A~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~~~~~~~~d~a~~~l~~~~--~~~~~~~~~a~ell 168 (218)
T Consensus 66 -----------ak~~-~~~~~~ekf~~~n~-~t~Ya~laaL~lAk~~ve~~~~d~A~aqL~~~l~~t~De~lk~l~~lRL 132 (207)
T COG2976 66 -----------AKKP-KSIAAAEKFVQANG-KTIYAVLAALELAKAEVEANNLDKAEAQLKQALAQTKDENLKALAALRL 132 (207)
T ss_pred -----------CCCC-HHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf -----------5770-25999999986156-3589999999999999863429999999999871452578999999999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999889989999999999835589989999999999950
Q gi|254780421|r 169 GISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209 (218)
Q Consensus 169 g~~~~~~Gd~~~A~~~y~~i~~~~~~p~~~r~ra~~~l~~l 209 (218)
T Consensus 133 Arvq~q~~k~D~AL~~L~t~~~~-----~w~~~~~elrGDi 168 (207)
T COG2976 133 ARVQLQQKKADAALKTLDTIKEE-----SWAAIVAELRGDI 168 (207)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCC-----CHHHHHHHHHHHH
T ss_conf 99999860388899987230111-----0788999974269