HHsearch alignment for GI: 254780421 and conserved domain: COG4235

>COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones].
Probab=98.43  E-value=8.1e-05  Score=48.21  Aligned_cols=188  Identities=13%  Similarity=0.098  Sum_probs=117.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             519999999999999999999999999999999-99999999-9841387666999999973125520699999999999
Q gi|254780421|r   21 YKWIAPLLILMILSLAIWFYLFDGSHEKKKNIV-GENFAQAL-ELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASI   98 (218)
Q Consensus        21 yk~ii~~~i~~i~~~~~~~~~~~~~q~~~~~~a-s~~y~~al-~~~~~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~   98 (218)
T Consensus        88 ~~~~~~~~v~~~~v~~~~y~~~g~y~~vg~~~q~~~r~~~~~a~~~~~~~~~~l~a~Le~~L~~nP~d~e--gW~~Lg~~  165 (287)
T COG4235          88 KKWLLARVVALVAVLALSYLLLGLYQAVGAPEQPADRLADPLAQPPAEQEMEALIARLETHLQQNPGDAE--GWDLLGRA  165 (287)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCH--HHHHHHHH
T ss_conf             3010578999999999999986576524785430034543201677733599999999999984988724--49999999


Q ss_pred             HHHCCHHHHHHHHHHHHHHHCCCCHHH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf             951100577899999987312689578-9999999999630269989999997531146423568999999999998899
Q gi|254780421|r   99 LVAKGDTKNAAEIFLKVANDDLAPLAV-RYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGK  177 (218)
Q Consensus        99 ~~~~g~~~~A~~~l~~i~~~~~~~~~~-~~lA~l~la~~~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd  177 (218)
T Consensus       166 ym~~~~~~~A~~AY~~A~rL~g~n~~~~~g~aea--L~~~a~~~~ta~a~~ll~~al~~-D~~~iral~lLA~~afe~g~  242 (287)
T COG4235         166 YMALGRASDALLAYRNALRLAGDNPEILLGLAEA--LYYQAGQQMTAKARALLRQALAL-DPANIRALSLLAFAAFEQGD  242 (287)
T ss_pred             HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH--HHHHCCCCCCHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHCCC
T ss_conf             9984443479999999987379988999999999--99953884449999999999843-97328899999999998145


Q ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCH
Q ss_conf             899999999998355899899999999999500340
Q gi|254780421|r  178 VQKAKTIFEELAKDNNSPFGISTRSQMILANIIASD  213 (218)
Q Consensus       178 ~~~A~~~y~~i~~~~~~p~~~r~ra~~~l~~l~~~~  213 (218)
T Consensus       243 ~~~A~~~Wq~lL~~lp~~~~rr~~ie~~ia~~~~~~  278 (287)
T COG4235         243 YAEAAAAWQMLLDLLPADDPRRSLIERSIARALAQR  278 (287)
T ss_pred             HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             999999999998518999823789999999987410