HHsearch alignment for GI: 254780421 and conserved domain: PRK02603

>PRK02603 photosystem I assembly protein Ycf3; Provisional.
Probab=98.17  E-value=0.00016  Score=46.33  Aligned_cols=123  Identities=15%  Similarity=0.087  Sum_probs=88.1

Q ss_pred             CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf             87666999999973125520699999999999951100577899999987312689578999999999963026998999
Q gi|254780421|r   67 NKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEI  146 (218)
Q Consensus        67 ~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~~~~~~~~d~a  146 (218)
T Consensus        13 k~ftv~ad~~~k~~p~~~~~k~A~~Yy~~G~~~q~~G~Y~EAle~Y~kAL~Le-~dp~D~s~ilyNiGlIY~~~G~~~kA   91 (172)
T PRK02603         13 KSFTVMADLILKILPINKKAKEAFVYYRDGMSAQNDGDYAEALENYEEALKLE-EDPNDRSYILYNMAIIYASNGEHDKA   91 (172)
T ss_pred             HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHHHHCCCHHHH
T ss_conf             24899999999981588633689999972257774579999999999987277-89620899997799999986998899


Q ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHHHC
Q ss_conf             9997531146423568999999999998899--------------89999999999835
Q gi|254780421|r  147 SKILQKLSEPSNPMHQFANEILGISALKFGK--------------VQKAKTIFEELAKD  191 (218)
Q Consensus       147 ~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd--------------~~~A~~~y~~i~~~  191 (218)
T Consensus        92 ie~Y~kALeiN-P~~~~AlNNlgvIY~k~G~~a~~~~~~~~~~~~fdkAa~yw~kAI~l  149 (172)
T PRK02603         92 LETYHQALELN-PKQPSALNNIAVIYHKRGRKAEEAGDQDEAEAWFDKAAEYWKQAIRL  149 (172)
T ss_pred             HHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999868-99789999999999998599998458778999999999999998850