HHsearch alignment for GI: 254780421 and conserved domain: PRK02603

>PRK02603 photosystem I assembly protein Ycf3; Provisional.
Probab=97.58  E-value=0.0028  Score=38.66  Aligned_cols=100  Identities=13%  Similarity=0.161  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC-CCHHHHHH
Q ss_conf             9999999999998413876669999999731255206-999999999999511005778999999873126-89578999
Q gi|254780421|r   51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLY-NPLSNMYIASILVAKGDTKNAAEIFLKVANDDL-APLAVRYA  128 (218)
Q Consensus        51 ~~as~~y~~al~~~~~~~~~~A~~~l~~l~~~~~~~y-a~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~-~~~~~~~l  128 (218)
T Consensus        33 k~A~~Yy~~G~~~q~~G~Y~EAle~Y~kAL~Le~dp~D~s~ilyNiGlIY~~~G~~~kAie~Y~kALeiNP~~~~AlNNl  112 (172)
T PRK02603         33 KEAFVYYRDGMSAQNDGDYAEALENYEEALKLEEDPNDRSYILYNMAIIYASNGEHDKALETYHQALELNPKQPSALNNI  112 (172)
T ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             68999997225777457999999999998727789620899997799999986998899999999998689978999999


Q ss_pred             HHHH--HHHHHHCCCCHHHHHHHH
Q ss_conf             9999--999630269989999997
Q gi|254780421|r  129 ATLQ--AASILVDTSSYEEISKIL  150 (218)
Q Consensus       129 A~l~--la~~~~~~~~~d~a~~~l  150 (218)
T Consensus       113 gvIY~k~G~~a~~~~~~~~~~~~f  136 (172)
T PRK02603        113 AVIYHKRGRKAEEAGDQDEAEAWF  136 (172)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf             999999859999845877899999