HHsearch alignment for GI: 254780421 and conserved domain: PRK02603
>PRK02603 photosystem I assembly protein Ycf3; Provisional.
Probab=97.58 E-value=0.0028 Score=38.66 Aligned_cols=100 Identities=13% Similarity=0.161 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC-CCHHHHHH
Q ss_conf 9999999999998413876669999999731255206-999999999999511005778999999873126-89578999
Q gi|254780421|r 51 NIVGENFAQALELFNSNKLDDARSSFEKILSQDNKLY-NPLSNMYIASILVAKGDTKNAAEIFLKVANDDL-APLAVRYA 128 (218)
Q Consensus 51 ~~as~~y~~al~~~~~~~~~~A~~~l~~l~~~~~~~y-a~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~-~~~~~~~l 128 (218)
T Consensus 33 k~A~~Yy~~G~~~q~~G~Y~EAle~Y~kAL~Le~dp~D~s~ilyNiGlIY~~~G~~~kAie~Y~kALeiNP~~~~AlNNl 112 (172)
T PRK02603 33 KEAFVYYRDGMSAQNDGDYAEALENYEEALKLEEDPNDRSYILYNMAIIYASNGEHDKALETYHQALELNPKQPSALNNI 112 (172)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 68999997225777457999999999998727789620899997799999986998899999999998689978999999
Q ss_pred HHHH--HHHHHHCCCCHHHHHHHH
Q ss_conf 9999--999630269989999997
Q gi|254780421|r 129 ATLQ--AASILVDTSSYEEISKIL 150 (218)
Q Consensus 129 A~l~--la~~~~~~~~~d~a~~~l 150 (218)
T Consensus 113 gvIY~k~G~~a~~~~~~~~~~~~f 136 (172)
T PRK02603 113 AVIYHKRGRKAEEAGDQDEAEAWF 136 (172)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 999999859999845877899999