HHsearch alignment for GI: 254780421 and conserved domain: PRK10049

>PRK10049 pgaA outer membrane protein PgaA; Provisional.
Probab=97.17  E-value=0.017  Score=33.85  Aligned_cols=141  Identities=9%  Similarity=0.017  Sum_probs=82.0

Q ss_pred             HHCCCHHHHHHHHHHHHHCCCCCHHHH---HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC------------CHHHHHH
Q ss_conf             413876669999999731255206999---9999999995110057789999998731268------------9578999
Q gi|254780421|r   64 FNSNKLDDARSSFEKILSQDNKLYNPL---SNMYIASILVAKGDTKNAAEIFLKVANDDLA------------PLAVRYA  128 (218)
Q Consensus        64 ~~~~~~~~A~~~l~~l~~~~~~~ya~l---A~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~------------~~~~~~l  128 (218)
T Consensus       335 L~~~qP~kA~~iy~~l~~~~~~~~~~~~~e~~~~LfYA~~e~e~~~eA~~l~~~~~~~~p~~~~~~g~~~~~PNddy~-~  413 (818)
T PRK10049        335 LDRRQPEKAAPILTELFYHPETIAPDLSDEELADLFYSLLESEQYPGALQVAVHTIETTPYFVRLYGLPTSIPNDDWL-Q  413 (818)
T ss_pred             HHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH-H
T ss_conf             863996899999999973485457653567887789998611118999999998653289604306888898882799-9


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             99999996302699899999975311464235689999999999988998999999999983558998999999999995
Q gi|254780421|r  129 ATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILAN  208 (218)
Q Consensus       129 A~l~la~~~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~~~~~p~~~r~ra~~~l~~  208 (218)
T Consensus       414 ~~~l~a~~~~~~ndL~~Ae~~le~l~~~-APgN~~L~~~~A~v~r~Rg~pr~Ae~~~~~a~~--l~P~~~~~~~~qa~~a  490 (818)
T PRK10049        414 GQSLLVQSLKASNDLPQAEKRLEELAYT-APGNQGLRIDYASVYQARGWPRAAENELKAAES--LEPRSLNLEVAQAWTA  490 (818)
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH--CCCCCHHHHHHHHHHH
T ss_conf             9999999999757849999999999863-999879999999999854995999999999870--0864279998899998