HHsearch alignment for GI: 254780421 and conserved domain: pfam04733
>pfam04733 Coatomer_E Coatomer epsilon subunit. This family represents the epsilon subunit of the coatomer complex, which is involved in the regulation of intracellular protein trafficking between the endoplasmic reticulum and the Golgi complex.
Probab=95.87 E-value=0.12 Score=28.58 Aligned_cols=145 Identities=14% Similarity=0.186 Sum_probs=94.0
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 99999998413876669999999731255206999999999999511005778999999873126895789999999999
Q gi|254780421|r 56 NFAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAAS 135 (218)
Q Consensus 56 ~y~~al~~~~~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~ 135 (218)
T Consensus 105 ~~~aati~~~~g~~e~AL~~l~~----~~-~lE--~~al~VQi~L~~nR~DLA~ke~~~~q-~~~eDs~l~qLa~a-wv~ 175 (290)
T pfam04733 105 RLLAAIIFIHEGDFDDALKHLHK----GE-NLE--AMALNVQILLKMHRIDLAEQQLKKMQ-QIDEDATLTQLANA-WVK 175 (290)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHC----CC-CHH--HHHHHHHHHHHCCCHHHHHHHHHHHH-HCCCCHHHHHHHHH-HHH
T ss_conf 99999999977999999999855----89-667--99999999997288367999999988-43510599999999-999
Q ss_pred HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-CCCCCHHHHHHHHHHH-HHHCCCH
Q ss_conf 6302699899999975311464235689999999999988998999999999983-5589989999999999-9500340
Q gi|254780421|r 136 ILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK-DNNSPFGISTRSQMIL-ANIIASD 213 (218)
Q Consensus 136 ~~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~-~~~~p~~~r~ra~~~l-~~l~~~~ 213 (218)
T Consensus 176 l~~Ggek~q~A~yif~EL~~~~~~-t~lllng~Av~~m~~~~~~eAe~~L~eAl~~d~~d~dtl---aNliv~s~~~gK~ 251 (290)
T pfam04733 176 LAVGGEKIQDAYYIFQEFSEKYDS-TPLLLNGQAVCCMCLGRYEEAESLLKEALDKDAKDPETL---INLVVCALHLGKP 251 (290)
T ss_pred HHHCCHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH---HHHHHHHHHHCCC
T ss_conf 972647789899999999852289-789999999999874787999999999987288988999---9999999980998