HHsearch results for GI: 254780421 and protein with PDBid: 1hz4_A
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transcription activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.96 E-value=0.00018 Score=44.78 Aligned_cols=127 Identities=13% Similarity=0.107 Sum_probs=43.4
Q ss_pred HHHCCCHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHH
Q ss_conf 841387666999999973125520---699999999999951100577899999987312--689578999999999963
Q gi|254780421|r 63 LFNSNKLDDARSSFEKILSQDNKL---YNPLSNMYIASILVAKGDTKNAAEIFLKVANDD--LAPLAVRYAATLQAASIL 137 (218)
Q Consensus 63 ~~~~~~~~~A~~~l~~l~~~~~~~---ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~--~~~~~~~~lA~l~la~~~ 137 (218)
....|++++|+..+++.+...++. -...+...++.+++..|++++|+..+...+.-. ..+......+...++.++
T Consensus 24 ~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~ 103 (373)
T 1hz4_A 24 AINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEIL 103 (373)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 99887999999999999854889992999999999999999879999999999999997475368799999999999999
Q ss_pred HCCCCHHHHHHHHHHHC-------CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 02699899999975311-------46423568999999999998899899999999998
Q gi|254780421|r 138 VDTSSYEEISKILQKLS-------EPSNPMHQFANEILGISALKFGKVQKAKTIFEELA 189 (218)
Q Consensus 138 ~~~~~~d~a~~~l~~~~-------~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~ 189 (218)
...++++++...+.... .+..+........+|.++...|++++|...|++++
T Consensus 104 ~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~~~~~g~~~~a~~~~~~a~ 162 (373)
T 1hz4_A 104 FAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGI 162 (373)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 98154899999999999997860466676999999999999998799899999999977