HHsearch results for GI: 254780421 and protein with PDBid: 1w3b_A

>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.83  E-value=1.6e-06  Score=57.47  Aligned_cols=136  Identities=17%  Similarity=0.163  Sum_probs=85.5

Q ss_pred             HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             99841387666999999973125520699999999999951100577899999987312689578999999999963026
Q gi|254780421|r   61 LELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDT  140 (218)
Q Consensus        61 l~~~~~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~~~~~  140 (218)
                      ......++.++|+..+++.++..++.  +.+.+.++.++...|++++|+..++......+...    ......+.++...
T Consensus       245 ~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~~~~~~~~~  318 (388)
T 1w3b_A          245 CVYYEQGLIDLAIDTYRRAIELQPHF--PDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHA----DSLNNLANIKREQ  318 (388)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHTCSSC--HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHTT
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHHC
T ss_conf             99998799999999999999729998--99999999999984779999998887763286036----8877899999987


Q ss_pred             CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-CCCCCHHHHHHHH
Q ss_conf             99899999975311464235689999999999988998999999999983-5589989999999
Q gi|254780421|r  141 SSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK-DNNSPFGISTRSQ  203 (218)
Q Consensus       141 ~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~-~~~~p~~~r~ra~  203 (218)
                      +++++|+..+.....- .|-...++..+|.++...|++++|++.|++++. +++.|.....+.+
T Consensus       319 ~~~~~A~~~~~~al~~-~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~  381 (388)
T 1w3b_A          319 GNIEEAVRLYRKALEV-FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN  381 (388)
T ss_dssp             TCHHHHHHHHHHHTTS-CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             8999999999999986-98989999999999998499999999999999739998999999999