HHsearch results for GI: 254780421 and protein with PDBid: 1w3b_A
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.66 E-value=6.2e-06 Score=53.79 Aligned_cols=136 Identities=14% Similarity=0.080 Sum_probs=96.1
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 99984138766699999997312552069999999999995110057789999998731268957899999999996302
Q gi|254780421|r 60 ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVD 139 (218)
Q Consensus 60 al~~~~~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~~~~ 139 (218)
+......+++++|+..+++.....+.. ....+.++.++...|++++|+..|..+++..+... -+.+.++.++..
T Consensus 210 ~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~l~~~~~~ 283 (388)
T 1w3b_A 210 GNVLKEARIFDRAVAAYLRALSLSPNH--AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFP----DAYCNLANALKE 283 (388)
T ss_dssp HHHHHTTTCTTHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCH----HHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHH
T ss_conf 999885687999999999998849752--79999999999987999999999999997299989----999999999998
Q ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC-CCCHHHHHHH
Q ss_conf 69989999997531146423568999999999998899899999999998355-8998999999
Q gi|254780421|r 140 TSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDN-NSPFGISTRS 202 (218)
Q Consensus 140 ~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~~~-~~p~~~r~ra 202 (218)
.+++++|+..+...... .|........+|.++...|++++|.+.|++++... +.+.....++
T Consensus 284 ~~~~~~A~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la 346 (388)
T 1w3b_A 284 KGSVAEAEDCYNTALRL-CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLA 346 (388)
T ss_dssp HSCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 47799999988877632-8603688778999999878999999999999986989899999999