HHsearch results for GI: 254780421 and protein with PDBid: 1ya0_A
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.07 E-value=0.059 Score=29.14 Aligned_cols=112 Identities=11% Similarity=-0.030 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 99999999951100577899999987312689578999999999963026998999999753114642356899999999
Q gi|254780421|r 91 SNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGI 170 (218)
Q Consensus 91 A~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~ 170 (218)
+...++......++...+...+...+.. . ..-+.+.++.++...+++++|+..+.....- .|..+.++..+|.
T Consensus 122 ~~~~lg~~~~~~~~~~~a~~~~~~~l~~----~--~~~~~~~LG~l~r~~~~~~~A~~~y~~A~~l-~P~~~~~~~~lg~ 194 (497)
T 1ya0_A 122 KSSQLGIISNKQTHTSAIVKPQSSSCSY----I--CQHCLVHLGDIARYRNQTSQAESYYRHAAQL-VPSNGQPYNQLAI 194 (497)
T ss_dssp ---------------------CCHHHHH----H--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTBSHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHCCC----C--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-CCCCHHHHHHHHH
T ss_conf 9986158760287589999999987699----8--8999999999999857999999999999987-8898999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 999889989999999999835589989999999999950
Q gi|254780421|r 171 SALKFGKVQKAKTIFEELAKDNNSPFGISTRSQMILANI 209 (218)
Q Consensus 171 ~~~~~Gd~~~A~~~y~~i~~~~~~p~~~r~ra~~~l~~l 209 (218)
++...|+...|..+|.+.+...++-+.-+......+...
T Consensus 195 l~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~~~~~ 233 (497)
T 1ya0_A 195 LASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKA 233 (497)
T ss_dssp HHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 999879999999999999817999889999999999874