HHsearch results for GI: 254780421 and protein with PDBid: 2ho1_A
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2fi7_A
Probab=99.03 E-value=1.5e-07 Score=63.88 Aligned_cols=141 Identities=21% Similarity=0.232 Sum_probs=76.1
Q ss_pred HHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 99999999-99984138766699999997312552069999999999995110057789999998731268957899999
Q gi|254780421|r 52 IVGENFAQ-ALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAAT 130 (218)
Q Consensus 52 ~as~~y~~-al~~~~~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~ 130 (218)
+..++|.. ++.....+++++|+..|++.++-.|+. .-+.+.+|.++...|++++|+..|+.+++..+.+. -+.
T Consensus 35 ~~~day~~Lg~~y~~~g~~~~A~~~~~~al~~~p~~--~~a~~~Lg~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~ 108 (252)
T 2ho1_A 35 EARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSS--ADAHAALAVVFQTEMEPKLADEEYRKALASDSRNA----RVL 108 (252)
T ss_dssp HHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH----HHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC----HHH
T ss_conf 899999999999998599999999999999839998--99999999999986999999999999987299770----788
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC-CCCCHHH
Q ss_conf 9999963026998999999753114-642356899999999999889989999999999835-5899899
Q gi|254780421|r 131 LQAASILVDTSSYEEISKILQKLSE-PSNPMHQFANEILGISALKFGKVQKAKTIFEELAKD-NNSPFGI 198 (218)
Q Consensus 131 l~la~~~~~~~~~d~a~~~l~~~~~-~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~~-~~~p~~~ 198 (218)
+.++.++...+++++++..+..... ...|....++..+|.++.+.|++++|++.|++++.. ++.|...
T Consensus 109 ~~la~~~~~~~~~~eA~~~~~~al~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 178 (252)
T 2ho1_A 109 NNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVA 178 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 9987889984548999999999998633751146541289998876999999999999998689989999