HHsearch results for GI: 254780421 and protein with PDBid: 2ho1_A

>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2fi7_A
Probab=98.82  E-value=1.4e-06  Score=57.76  Aligned_cols=135  Identities=13%  Similarity=0.061  Sum_probs=102.7

Q ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf             99999984138766699999997312552069999999999995110057789999998731268957899999999996
Q gi|254780421|r   57 FAQALELFNSNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQAASI  136 (218)
Q Consensus        57 y~~al~~~~~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~  136 (218)
                      +.-+......+++++|+..+++.++..|..  ..+.+.++.++...|++++|+..+..++.....|.  ...+.+.++.+
T Consensus        75 ~~Lg~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~~~la~~~~~~~~~~eA~~~~~~al~~~~~p~--~~~~~~~lg~~  150 (252)
T 2ho1_A           75 AALAVVFQTEMEPKLADEEYRKALASDSRN--ARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPE--RSRVFENLGLV  150 (252)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTT--HHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC--HHHHHHHHHHH
T ss_conf             999999998699999999999998729977--07889987889984548999999999998633751--14654128999


Q ss_pred             HHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH
Q ss_conf             302699899999975311464235689999999999988998999999999983558998
Q gi|254780421|r  137 LVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPF  196 (218)
Q Consensus       137 ~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~~~~~p~  196 (218)
                      +...+++++|+..+.....-+ |-...+...+|.++.+.|++++|+..|+++........
T Consensus       151 ~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~  209 (252)
T 2ho1_A          151 SLQMKKPAQAKEYFEKSLRLN-RNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNA  209 (252)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCH
T ss_pred             HHHCCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
T ss_conf             887699999999999999868-99899999999999986999999999999985587999