HHsearch results for GI: 254780421 and protein with PDBid: 2kat_A
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.66 E-value=0.00039 Score=42.63 Aligned_cols=80 Identities=11% Similarity=0.106 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 77899999987312689578999999999963026998999999753114642356899999999999889989999999
Q gi|254780421|r 106 KNAAEIFLKVANDDLAPLAVRYAATLQAASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIF 185 (218)
Q Consensus 106 ~~A~~~l~~i~~~~~~~~~~~~lA~l~la~~~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y 185 (218)
+++++.|+.++...+.+. .+.+.+|.+++..+++++|+..+...... .|....++..+|.++...|++++|++.|
T Consensus 2 q~~~e~le~~l~~~pd~~----~~~~~lg~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 76 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNM----LLRFTLGKTYAEHEQFDAALPHLRAALDF-DPTYSVAWKWLGKTLQGQGDRAGARQAW 76 (115)
T ss_dssp CCHHHHHHHHHTTTCCCH----HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 899999999987299989----99999999999859999999999997887-4305999999999999978999999999
Q ss_pred HHHHH
Q ss_conf 99983
Q gi|254780421|r 186 EELAK 190 (218)
Q Consensus 186 ~~i~~ 190 (218)
++++.
T Consensus 77 ~~al~ 81 (115)
T 2kat_A 77 ESGLA 81 (115)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99996