HHsearch results for GI: 254780421 and protein with PDBid: 2uy1_A
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.71 E-value=0.0021 Score=38.09 Aligned_cols=121 Identities=8% Similarity=0.041 Sum_probs=40.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHCCCCH
Q ss_conf 387666999999973125520699999999999951100577899999987312689--578999999999963026998
Q gi|254780421|r 66 SNKLDDARSSFEKILSQDNKLYNPLSNMYIASILVAKGDTKNAAEIFLKVANDDLAP--LAVRYAATLQAASILVDTSSY 143 (218)
Q Consensus 66 ~~~~~~A~~~l~~l~~~~~~~ya~lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~--~~~~~lA~l~la~~~~~~~~~ 143 (218)
.++.+.+...++......|+. ...+..+..+...|++++|...|...+...... ........+..+..+...+++
T Consensus 226 ~~~~~~a~~~~~~a~~~~p~~---~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (493)
T 2uy1_A 226 IGQKEKAKKVVERGIEMSDGM---FLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGL 302 (493)
T ss_dssp TTCHHHHHHHHHHHHHHCCSS---HHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCH
T ss_pred CCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCH
T ss_conf 230889999888875259968---99999999999874399999999999986730010131089999999999987998
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99999975311464235689999999999988998999999999983
Q gi|254780421|r 144 EEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK 190 (218)
Q Consensus 144 d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~ 190 (218)
+++...+....... |-........+..+...|++++|++.|++++.
T Consensus 303 ~~a~~~~~~a~~~~-p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~ 348 (493)
T 2uy1_A 303 ELFRKLFIELGNEG-VGPHVFIYCAFIEYYATGSRATPYNIFSSGLL 348 (493)
T ss_dssp HHHHHHHHHHTTSC-CCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999999997749-98899999999998754489999999999987