HHsearch results for GI: 254780421 and protein with PDBid: 3dss_A
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3c72_A*
Probab=97.20 E-value=0.0019 Score=38.46 Aligned_cols=63 Identities=13% Similarity=0.041 Sum_probs=40.1
Q ss_pred CCHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-CCCCCHHHHHHHH
Q ss_conf 99899999975311--464235689999999999988998999999999983-5589989999999
Q gi|254780421|r 141 SSYEEISKILQKLS--EPSNPMHQFANEILGISALKFGKVQKAKTIFEELAK-DNNSPFGISTRSQ 203 (218)
Q Consensus 141 ~~~d~a~~~l~~~~--~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~-~~~~p~~~r~ra~ 203 (218)
+.+++++..+.... .|..|....++-.+|.++.+.|++++|++.|++++. +|.-+..++.+..
T Consensus 252 ~~~~~a~~~~~~al~~~p~~~~~~~~l~~l~~~~~~~~~~~eA~~~~~kai~ldP~~~~y~~~l~~ 317 (331)
T 3dss_A 252 TVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRS 317 (331)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 669999999999998688997999999999999986489999999999999879886999999999