HHsearch results for GI: 254780421 and protein with PDBid: 3ieg_A
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, unfolded protein response; 2.51A {Mus musculus}
Probab=98.77 E-value=4e-06 Score=54.97 Aligned_cols=139 Identities=12% Similarity=0.053 Sum_probs=90.6
Q ss_pred HHHCCCHHHHHHHHHHHHHCCCCC---HHH-------HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 841387666999999973125520---699-------9999999999511005778999999873126895789999999
Q gi|254780421|r 63 LFNSNKLDDARSSFEKILSQDNKL---YNP-------LSNMYIASILVAKGDTKNAAEIFLKVANDDLAPLAVRYAATLQ 132 (218)
Q Consensus 63 ~~~~~~~~~A~~~l~~l~~~~~~~---ya~-------lA~l~lA~~~~~~g~~~~A~~~l~~i~~~~~~~~~~~~lA~l~ 132 (218)
....++.+.|+..+++.....++. +.. ...+..+..++..|++.+|+..+..++...+........+...
T Consensus 198 ~~~~~~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 277 (359)
T 3ieg_A 198 YYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKER 277 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
T ss_conf 99854499999999999972989899999888899887667654457653158888887889998398631011100001
Q ss_pred HHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 9996302699899999975311464235689999999999988998999999999983558998999999
Q gi|254780421|r 133 AASILVDTSSYEEISKILQKLSEPSNPMHQFANEILGISALKFGKVQKAKTIFEELAKDNNSPFGISTRS 202 (218)
Q Consensus 133 la~~~~~~~~~d~a~~~l~~~~~~~~~~~~~a~ellg~~~~~~Gd~~~A~~~y~~i~~~~~~p~~~r~ra 202 (218)
++.++...+++++|+..+.....- .|-...++..+|.++...|++++|++.|++++...+....++...
T Consensus 278 l~~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l 346 (359)
T 3ieg_A 278 ICHCFSKDEKPVEAIRICSEVLQM-EPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGL 346 (359)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 110000222599999999999984-999899999999999985999999999999987398989999999