HHsearch alignment for GI: 254780423 and conserved domain: COG1812
>COG1812 MetK Archaeal S-adenosylmethionine synthetase [Amino acid transport and metabolism].
Probab=98.41 E-value=2.7e-05 Score=54.23 Aligned_cols=313 Identities=19% Similarity=0.186 Sum_probs=166.7
Q ss_pred ECCCCCCCHHHHHHHHHHHHH----HHHHHCCCCCCCCCCCCEEEEEECCCC---------------EEEEEEEEECCCC
Q ss_conf 008878831689886889999----998636012356667605999931498---------------4999878524655
Q gi|254780423|r 10 ESVSEGHPDKICDRISDEIVD----LVYREAIESKMDVNSVRVACEVLVTKN---------------KVIVAGEVRLPHG 70 (413)
Q Consensus 10 ESVs~GHPDKicDqISDaILD----~~L~~Dp~sk~~~~~~RVA~Et~v~~~---------------~V~v~GEI~~~~~ 70 (413)
T Consensus 23 ERKGlGHPDsiaDgiAE~vsr~Ls~~Yler--fG~IlH---HN~Dk~~ivgG~s~p~FGGGevi~PIyIll~GRAt~~-- 95 (400)
T COG1812 23 ERKGLGHPDSIADGIAEAVSRALSKYYLER--FGVILH---HNTDKVQIVGGQSAPKFGGGEVIEPIYILLSGRATKE-- 95 (400)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHHHH--HCCEEC---CCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCEEEE--
T ss_conf 633889970577889999999999999997--293000---3565048974631566789622314899995315666--
Q ss_pred CCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCC---CCCCCCC-CCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
Q ss_conf 554334454200167789999999984085870---1257332-210003333456777554420353000589862488
Q gi|254780423|r 71 LSKKDSITGQYVVDKEKFEKVVRSVIRSIGYEQ---EGFHWET-VDVEVLLHSQSSDIAYGVDNASDDCSTLGAGDQGIM 146 (413)
Q Consensus 71 i~~~~~~tt~~~v~~~di~~ivR~~i~~IGY~~---~gfd~~~-~~v~~~i~~QS~dIa~GVd~~~~~~~~~GAGDQGiM 146 (413)
T Consensus 96 ----------~~g~~ip~~~ia~~AAk~--yLr~~~r~LD~E~~Viid~rig~GS~dL~dvf~~~~~--~VplANDTSfg 161 (400)
T COG1812 96 ----------VEGVEIPVGSIAIKAAKE--YLRENLRNLDVENHVIIDVRIGQGSVDLVDVFERAKE--EVPLANDTSFG 161 (400)
T ss_pred ----------ECCEECCCHHHHHHHHHH--HHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCC--CCCCCCCCCCE
T ss_conf ----------567251422879999999--9986354478442289997316885567877763255--77454566311
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCC---CCCHH
Q ss_conf 874206645448757999999999999975203576410011782689999749763145457887650673---26899
Q gi|254780423|r 147 FGYACRETADFMPAPIYYAHRILRTLADARKNSGGDVSKLGPDAKSQVTIRYVDNKVCEVKSIVLSIQHFDP---TWDRG 223 (413)
Q Consensus 147 FGYAc~ET~~~MPlpi~lAh~L~krL~~~Rk~~~g~~~~L~PDgKsQVTveY~~~kP~~i~tVViStQH~~~---~~~~~ 223 (413)
T Consensus 162 VG~APLs~tErlVl------etEr~lns~-~~-k~~~P~vGeDiKVMgl-R~~~~i~LTIa~a~V~~~v~~~~~Y~~~k~ 232 (400)
T COG1812 162 VGFAPLSETERLVL------ETERYLNSP-EF-KKKLPAVGEDIKVMGL-REGDEISLTIAAALVDKYVEDIDEYIEVKE 232 (400)
T ss_pred ECCCCCCHHHHHHH------HHHHHHCCH-HH-CCCCCCCCCCEEEEEE-ECCCEEEEEEEHHHHHHHHCCHHHHHHHHH
T ss_conf 22577867899999------998775474-23-0248875775179987-318868999867778776367899999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEC-------C---CCCCCCCCCCCEEECC-CCCCCCCCCCCCCCCC
Q ss_conf 999887652012332246885427999178837855-------8---7300365556111024-5776667775335657
Q gi|254780423|r 224 KVRSVVEPYILKALEDIKISPDCSWYINPAGKFVIG-------G---PCSDAGLTGRKIIVDT-YGGASPHGGGAFSGKD 292 (413)
Q Consensus 224 ~~~~ii~~vI~~~l~~~~l~~~t~~~INPtG~FviG-------G---P~~D~GLTGRKiiVDt-YGg~~~hGGGAfSGKD 292 (413)
T Consensus 233 ~v~~~VedlA~~-----it~~~v~v~iNtaD~~e~~~~YlTvTGTSaE~GDdGsVGRGNR~nGLITp~RpmSmEAaaGKN 307 (400)
T COG1812 233 EVRKHVEDLASE-----ITDREVEVYINTADDPERGSVYLTVTGTSAEQGDDGSVGRGNRVNGLITPNRPMSMEAAAGKN 307 (400)
T ss_pred HHHHHHHHHHHH-----HHCCCEEEEEECCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999999999866-----421322899743666666739999532315307776646666446413799976420016899
Q ss_pred CC-HHHHHHHHHHHHHHHHHHHHCH-HHHHEEEEEECCCCC--CCEEEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 44-0457788899999999975082-322110013005835--55079998248886898999999997
Q gi|254780423|r 293 IT-KVDRAAAYAARYLAKNIVAAGL-ADRCTIQLSYAIGIS--RPLSIFVDLHDSGKVSESCVANAINK 357 (413)
Q Consensus 293 pt-KVDRSaAY~AR~iAKniVaagl-a~~c~vqlsYaIG~~--~P~si~V~t~gt~~~~d~~i~~~i~~ 357 (413)
T Consensus 308 PvnHVGKiYN~Ls~~iA~~I~~ev~~v~evyv~ilsqIGkPId~P~~~~vqvi~~~~~~~~e~~~e~~~ 376 (400)
T COG1812 308 PVNHVGKIYNVLANQIANEIVEEVPGVEEVYVRILSQIGKPIDEPKVASVQVITKGGEDVKEVENEAEN 376 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCEEEEEEEECCCEEHHHHHHHHHH
T ss_conf 411357899999999999999864886259887044318968987167799995386018988899999