HHsearch alignment for GI: 254780424 and conserved domain: COG2390

>COG2390 DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].

Probab=94.37  E-value=0.11  Score=30.87  Aligned_cols=60  Identities=18%  Similarity=0.264  Sum_probs=42.6

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH-----CCCCCCC--------HHHHHHHHHHCCCCHHHH
Q ss_conf             99999999999819979999998724699999985-----2898835--------899999997549999995
Q gi|254780424|r   14 NVGKRIRLRRMILGMSQEKLGECLGITFQQVQKYE-----KGVNRVG--------ASRLQHISEVLESPISFF   73 (144)
Q Consensus        14 ~iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E-----~G~~~ps--------~~~L~~iA~~l~v~~~~l   73 (144)
T Consensus        13 ~l~~~~A~lYY~~gltQ~eIA~~LgiSR~~v~rlL~~Ar~~GiV~I~i~~~~~~~~~Le~~L~~~fgL~~a~V   85 (321)
T COG2390          13 RLLARAAWLYYVEGLTQSEIAERLGISRATVSRLLAKAREEGIVKISINSPVEGCLELEQQLKERFGLKEAIV   85 (321)
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf             9999999999846887999998839889999999999998793899967987653999999999659976999