HHsearch alignment for GI: 254780424 and conserved domain: COG2944

>COG2944 Predicted transcriptional regulator [Transcription].
Probab=98.51  E-value=2.2e-07  Score=67.44  Aligned_cols=46  Identities=28%  Similarity=0.480  Sum_probs=41.7

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf             9999999999819979999998724699999985289883589999
Q gi|254780424|r   15 VGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQ   60 (144)
Q Consensus        15 iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~   60 (144)
T Consensus        45 s~~eIk~iRe~~~lSq~vFA~~L~vs~~Tv~~WEqGr~kPsg~Alk   90 (104)
T COG2944          45 SPTEIKAIREKLGLSQPVFARYLGVSVSTVRKWEQGRKKPSGAALK   90 (104)
T ss_pred             CHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHH
T ss_conf             8899999999828889999999888799999998178589979999