HHsearch alignment for GI: 254780424 and conserved domain: PRK10014
>PRK10014 DNA-binding transcriptional repressor MalI; Provisional.
Probab=95.64 E-value=0.017 Score=36.11 Aligned_cols=49 Identities=14% Similarity=0.139 Sum_probs=40.6
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH---HHHHHHHHHCCCCHHHH
Q ss_conf 81997999999872469999998528988358---99999997549999995
Q gi|254780424|r 25 ILGMSQEKLGECLGITFQQVQKYEKGVNRVGA---SRLQHISEVLESPISFF 73 (144)
Q Consensus 25 ~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~---~~L~~iA~~l~v~~~~l 73 (144)
T Consensus 4 ~kkvTi~dIA~~aGVS~aTVSrvLn~~~~Vs~eTr~rV~~aa~elgY~pn~~ 55 (342)
T PRK10014 4 AKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNQAIEELGFVRNRQ 55 (342)
T ss_pred CCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHH
T ss_conf 9988799999998969999999977989999999999999999948997867