HHsearch alignment for GI: 254780424 and conserved domain: TIGR02959

>TIGR02959 SigZ RNA polymerase sigma factor, SigZ family; InterPro: IPR014304 This entry is a group of RNA polymerase sigma factors where one of the members is designated as SigZ in Bacillus subtilis . This group has a very sporadic distribution, B. subtilis, for instance, being the only sequenced strain of Bacilli with a member Dechloromonas aromatica (strain RCB), that appears to have two of these sigma factors. A member of which appears on a plasmid found in Photobacterium profundum SS9 and Vibrio fischeri (strain ATCC 700601 / ES114), where a second one is chromosomally encoded..
Probab=93.27  E-value=0.024  Score=35.20  Aligned_cols=33  Identities=21%  Similarity=0.475  Sum_probs=27.6

Q ss_pred             HHHHCCCCHHHHHHHHHHHHHH-HHHHHCCCCCC
Q ss_conf             9998199799999987246999-99985289883
Q gi|254780424|r   22 RRMILGMSQEKLGECLGITFQQ-VQKYEKGVNRV   54 (144)
Q Consensus        22 ~R~~~glTQ~eLA~~lGvs~s~-is~~E~G~~~p   54 (144)
T Consensus       111 L~el~G~sQ~e~A~kLGlSlSGaKSRVQRGR~~L  144 (170)
T TIGR02959       111 LTELEGLSQKEIAEKLGLSLSGAKSRVQRGRKKL  144 (170)
T ss_pred             HHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf             8750799827998761753351567889999999