HHsearch alignment for GI: 254780424 and conserved domain: smart00352
>smart00352 POU Found in Pit-Oct-Unc transcription factors.
Probab=96.13 E-value=0.014 Score=36.75 Aligned_cols=54 Identities=20% Similarity=0.454 Sum_probs=41.0
Q ss_pred CCHHHHH-HHHHHHHHHHHCCCCHHHHHHHHH------HHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 9989999-999999999981997999999872------4699999985289883589999999
Q gi|254780424|r 8 PNPVDIN-VGKRIRLRRMILGMSQEKLGECLG------ITFQQVQKYEKGVNRVGASRLQHIS 63 (144)
Q Consensus 8 ~~~~d~~-iG~rIr~~R~~~glTQ~eLA~~lG------vs~s~is~~E~G~~~ps~~~L~~iA 63 (144)
T Consensus 4 ~~l~Ele~Fa~~fk~rRi~LG~TQ~dVG~aL~~l~g~~~SQttIcRFE~l~--LS~kn~~kLk 64 (75)
T smart00352 4 TDPRELEAFAKTFKQRRIKLGFTQADVGLALGALYGPDFSQTTICRFEALQ--LSFKNMCKLK 64 (75)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC--CCHHHHHHHH
T ss_conf 999999999999999898737759999999998618643146888988605--4798899889