HHsearch alignment for GI: 254780424 and conserved domain: smart00352

>smart00352 POU Found in Pit-Oct-Unc transcription factors.
Probab=96.13  E-value=0.014  Score=36.75  Aligned_cols=54  Identities=20%  Similarity=0.454  Sum_probs=41.0

Q ss_pred             CCHHHHH-HHHHHHHHHHHCCCCHHHHHHHHH------HHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf             9989999-999999999981997999999872------4699999985289883589999999
Q gi|254780424|r    8 PNPVDIN-VGKRIRLRRMILGMSQEKLGECLG------ITFQQVQKYEKGVNRVGASRLQHIS   63 (144)
Q Consensus         8 ~~~~d~~-iG~rIr~~R~~~glTQ~eLA~~lG------vs~s~is~~E~G~~~ps~~~L~~iA   63 (144)
T Consensus         4 ~~l~Ele~Fa~~fk~rRi~LG~TQ~dVG~aL~~l~g~~~SQttIcRFE~l~--LS~kn~~kLk   64 (75)
T smart00352        4 TDPRELEAFAKTFKQRRIKLGFTQADVGLALGALYGPDFSQTTICRFEALQ--LSFKNMCKLK   64 (75)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC--CCHHHHHHHH
T ss_conf             999999999999999898737759999999998618643146888988605--4798899889