HHsearch results for GI: 254780424 and protein with PDBid: 2b5a_A

>2b5a_A C.BCLI; helix-turn-helix motif, gene regulation; 1.54A {Bacillus caldolyticus} SCOP: a.35.1.3

Probab=99.60  E-value=2e-15  Score=117.68  Aligned_cols=70  Identities=24%  Similarity=0.419  Sum_probs=64.2

Q ss_pred             CCHHH--HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCCC
Q ss_conf             99899--99999999999981997999999872469999998528988358999999975499999950677
Q gi|254780424|r    8 PNPVD--INVGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPISFFFDVS   77 (144)
Q Consensus         8 ~~~~d--~~iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~l~v~~~~l~~~~   77 (144)
                      .|.+|  ..+|++||.+|+.+||||++||..+|||+++|++||+|...|+++.|.+||.+|||++++||...
T Consensus         2 ~~~~~~~~~ig~~ir~~R~~~gltq~~lA~~~gvs~~~i~~~E~g~~~ps~~~l~~la~~l~v~~~~l~~~~   73 (77)
T 2b5a_A            2 INEIEIKRKFGRTLKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALDIPASTFFRKM   73 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTTCCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCC
T ss_conf             865899999999999999981999999998979699999999879989999999999999798899985432