HHsearch results for GI: 254780424 and protein with PDBid: 3o9x_A
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B*
Probab=99.01 E-value=1.3e-10 Score=86.89 Aligned_cols=58 Identities=22% Similarity=0.275 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHH
Q ss_conf 99999999998199799999987246999999852898835899999997549999995
Q gi|254780424|r 15 VGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPISFF 73 (144)
Q Consensus 15 iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~l~v~~~~l 73 (144)
-++.||.+|+.+||||++||+.+|+|.++|++||+|...|+... .++.++|+..+++|
T Consensus 72 ~~e~ir~~R~~~glsQ~elA~~lg~~~~ti~~~E~G~~~p~~~~-~~l~~~l~~~p~~l 129 (133)
T 3o9x_A 72 APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPST-IKLLRVLDKHPELL 129 (133)
T ss_dssp CHHHHHHHHHHTTCCHHHHHHHHCSCTTHHHHHHHTSSCCCHHH-HHHHHHHHHCGGGH
T ss_pred CHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHH-HHHHHHHCCCCHHH
T ss_conf 99999999998499999999995999999999986998899999-99999984385478