HHsearch results for GI: 254780424 and protein with PDBid: 3op9_A

>3op9_A PLI0006 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, transcription regulat; HET: MSE; 1.90A {Listeria innocua}

Probab=99.67  E-value=5.4e-16  Score=121.27  Aligned_cols=66  Identities=12%  Similarity=0.223  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCC
Q ss_conf             999999999998199799999987246999999852898835899999997549999995067744
Q gi|254780424|r   14 NVGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPISFFFDVSPT   79 (144)
Q Consensus        14 ~iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~l~v~~~~l~~~~~~   79 (144)
                      .+|+|||.+|+.+||||++||+++|||.++|++||+|.+.|+.++|.+||++|||+++||+++...
T Consensus         9 ~~g~rlk~~R~~~gltq~elA~~~gvs~~~vs~~E~g~~~Ps~~~l~~ia~~l~vs~~~Ll~~~~~   74 (114)
T 3op9_A            9 QFAENLSRLKKEHGLKNHQIAELLNVQTRTVAYYMSGETKPDIEKLIRLATYFHLSIDELVGYVQE   74 (114)
T ss_dssp             CHHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHHTSSCCCHHHHHHHHHHHTCCHHHHHTCCCC
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCC
T ss_conf             999999999998599999997610887327999965878999999999999959989999288753