HHSEARCH alignment of GI: 254780424 and SCOP domain: d1b0na2

Alignment

Probab=99.57  E-value=2.5e-15  Score=115.44  Aligned_cols=65  Identities=23%  Similarity=0.344  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC-CCCHHHHHHHHHHCCCCHHHHHCCCC
Q ss_conf             999999999998199799999987246999999852898-83589999999754999999506774
Q gi|254780424|r   14 NVGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVN-RVGASRLQHISEVLESPISFFFDVSP   78 (144)
Q Consensus        14 ~iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~-~ps~~~L~~iA~~l~v~~~~l~~~~~   78 (144)
                      .||++||++|.++||||.+||+++|||.++|++||+|.+ .|++++|.+||++||||++|||+...
T Consensus         1 ~ig~~ik~~R~~~gltq~~la~~~gis~~~i~~~E~g~~~~ps~~~l~~ia~~l~v~~~~l~~~~~   66 (68)
T d1b0na2           1 MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKH   66 (68)
T ss_dssp             CCHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCCSCCCHHHHHHHHHHHTCCHHHHHCCTT
T ss_pred             CHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCC
T ss_conf             979999999998299999999897979999999985998999999999999998986999839988

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: SinR domain-like
domain: SinR repressor, DNA-binding domain
species: Bacillus subtilis [TaxId: 1423]