HHSEARCH alignment of GI: 254780424 and SCOP domain: d1efaa1

Alignment

Probab=95.21  E-value=0.011  Score=34.53  Aligned_cols=45  Identities=16%  Similarity=0.204  Sum_probs=35.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH---HHHCCCCH
Q ss_conf             1997999999872469999998528988358999999---97549999
Q gi|254780424|r   26 LGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHI---SEVLESPI   70 (144)
Q Consensus        26 ~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~i---A~~l~v~~   70 (144)
                      +..|..++|+..|||.+++|++-+|...++.++-.+|   |+-||--+
T Consensus         1 k~~Ti~diA~~agvS~sTVSr~l~~~~~vs~~tr~rI~~~a~~lgY~p   48 (59)
T d1efaa1           1 KPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIP   48 (59)
T ss_dssp             CCCCHHHHHHTTTSCHHHHHHHHTTCSSCCTHHHHHHHHHHHHHTCCC
T ss_pred             CCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf             988899999897979999999977998679999999999999988986

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: GalR/LacI-like bacterial regulator
domain: Lac repressor (LacR), N-terminal domain
species: Escherichia coli [TaxId: 562]