HHSEARCH alignment of GI: 254780424 and SCOP domain: d1jhga_

Alignment

Probab=92.21  E-value=0.094  Score=28.51  Aligned_cols=39  Identities=26%  Similarity=0.459  Sum_probs=33.1

Q ss_pred             HHHHHHHHHHH-HCC-CCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             99999999999-819-9799999987246999999852898
Q gi|254780424|r   14 NVGKRIRLRRM-ILG-MSQEKLGECLGITFQQVQKYEKGVN   52 (144)
Q Consensus        14 ~iG~rIr~~R~-~~g-lTQ~eLA~~lGvs~s~is~~E~G~~   52 (144)
                      .+++|++-++. ..| +||.++|+.+|||..||++.-+--.
T Consensus        43 ~la~R~~ia~~L~~G~~s~reI~~~~gvs~aTItR~s~~Lk   83 (101)
T d1jhga_          43 ALGTRVRIIEELLRGEMSQRELKNELGAGIATITRGSNSLK   83 (101)
T ss_dssp             HHHHHHHHHHHHHHCCSCHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             99999999999990896799999996987577889999987

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: TrpR-like
family: Trp repressor, TrpR
domain: Trp repressor, TrpR
species: Escherichia coli [TaxId: 562]