HHSEARCH alignment of GI: 254780424 and SCOP domain: d1r69a_

Alignment

Probab=99.53  E-value=4.6e-15  Score=113.78  Aligned_cols=61  Identities=21%  Similarity=0.458  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCC
Q ss_conf             99999999998199799999987246999999852898835899999997549999995067
Q gi|254780424|r   15 VGKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPISFFFDV   76 (144)
Q Consensus        15 iG~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~l~v~~~~l~~~   76 (144)
                      ||+|||.+|+.+||||++||+.+|||.++|++||+|++ |+.+.|.+||++|||+++||+.|
T Consensus         2 ig~rik~~R~~~g~sq~elA~~~gvs~~~is~~E~g~~-~~~~~l~~ia~~l~v~~~~l~~G   62 (63)
T d1r69a_           2 ISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKT-KRPRFLPELASALGVSVDWLLNG   62 (63)
T ss_dssp             HHHHHHHHHHHTTCCHHHHHHHHTSCHHHHHHHHTTSC-SSCTTHHHHHHHTTCCHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCC-CCHHHHHHHHHHHCCCHHHHHHC
T ss_conf             89999999998499699999983739999999878989-49899999999989689998448

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: Phage repressors
domain: 434 C1 repressor, DNA-binding domain
species: Bacteriophage 434 [TaxId: 10712]