HHSEARCH alignment of GI: 254780424 and SCOP domain: d2icta1

Alignment

Probab=99.47  E-value=4.5e-14  Score=107.42  Aligned_cols=61  Identities=15%  Similarity=0.194  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCC
Q ss_conf             9999999998199799999987246999999852898835899999997549999995067
Q gi|254780424|r   16 GKRIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRLQHISEVLESPISFFFDV   76 (144)
Q Consensus        16 G~rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~~~L~~iA~~l~v~~~~l~~~   76 (144)
                      |++||++|+.+||||.+||+.+|||+++|++||+|++.|+.+.+.+||++|||+++|+++.
T Consensus         3 Ge~lke~r~~~glsq~~LA~~lGvs~~~is~ie~g~~~~s~~~~~kla~~lgvs~~~~L~l   63 (87)
T d2icta1           3 GDIIQESLDELNVSLREFARAMEIAPSTASRLLTGKAALTPEMAIKLSVVIGSSPQMWLNL   63 (87)
T ss_dssp             HHHHHHHHHHHTCCHHHHHHHHTCCHHHHHHHHHTSSCCCHHHHHHHHHHTCSCHHHHHHH
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHH
T ss_conf             7999999998699999999997246999999998501798999999999989199999821

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: SinR domain-like
domain: Antitoxin HigA
species: Escherichia coli [TaxId: 562]