HHSEARCH alignment of GI: 254780424 and SCOP domain: d2ox6a1

Alignment

Probab=93.64  E-value=0.13  Score=27.66  Aligned_cols=63  Identities=19%  Similarity=0.335  Sum_probs=45.6

Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH---HHHHHHHHHCCCC-------HHHHHCCCCCC
Q ss_conf             999999981997999999872469999998528988358---9999999754999-------99950677443
Q gi|254780424|r   18 RIRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGA---SRLQHISEVLESP-------ISFFFDVSPTV   80 (144)
Q Consensus        18 rIr~~R~~~glTQ~eLA~~lGvs~s~is~~E~G~~~ps~---~~L~~iA~~l~v~-------~~~l~~~~~~~   80 (144)
                      .|+.+|..+|||.+++|+..+.|..-+-.||.|....+.   ..|..|-++....       +..||...+..
T Consensus         7 e~~ylr~slglt~aqv~~l~k~se~dv~aweage~~~~~laqkklleide~iemqvlnt~dgieelfkkepkr   79 (162)
T d2ox6a1           7 EMSYLRQSLSLSAAQVGQLTNHSEAEVLAWENAETQAPELAQKKLLDIDDIIEMQVLNTTDGIEALFKKEPKR   79 (162)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCC
T ss_conf             7999999707789998887455777755355057767527786450188888887752142199997418430

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: YdiL-like
domain: Hypothetical protein SO3848
species: Shewanella oneidensis [TaxId: 70863]