RPSBLAST alignment of GI: 254780424 and protein with PDBid: 1lmb
>1lmb_3 Protein (lambda repressor); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 1.80A {Enterobacteria phage lambda} SCOP: a.35.1.2 PDB: 1lrp_A 1rio_A 1lli_A* Length = 92
Score = 53.4 bits (128), Expect = 2e-08
Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 4 NKKIPNPVDINVGKR----IRLRRMILGMSQEKLGECLGITFQQVQKYEKGVNRVGASRL 59
KK + +R ++ LG+SQE + + +G+ V G+N + A
Sbjct: 3 KKKPLTQEQLEDARRLKAIYEKKKNELGLSQESVADKMGMGQSGVGALFNGINALNAYNA 62
Query: 60 QHISEVLESPISFFFD 75
++++L+ + F
Sbjct: 63 ALLAKILKVSVEEFSP 78