HHsearch alignment for GI: 254780425 and conserved domain: PRK02628

>PRK02628 nadE NAD synthetase; Reviewed.
Probab=99.59  E-value=1.2e-13  Score=107.33  Aligned_cols=234  Identities=15%  Similarity=0.114  Sum_probs=136.5

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCH----HHHHHHH----HHHHHHHC
Q ss_conf             555321001244203555433335789987543101334668618983121011000----1123466----77656410
Q gi|254780425|r  240 KISPVIRIVQPGINPAIKEDREKILERYLSLTALPVSAGELEPVIIVWAYLPFPFSI----VDQPSIL----KKIASVLK  311 (518)
Q Consensus       240 ~~~~~V~iVQpni~~~~k~~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~~~----~~~~~~~----~~l~~~~~  311 (518)
T Consensus        10 ~gfirvA~a~~~~~Vg---D~~~N~~~I~~~i~---~A~~~ga~lvvfPEL~ltGY~~eDL~l~~~fl~~~~~aL~~l~~   83 (678)
T PRK02628         10 HGFVRVAAATPKVRVA---DPAFNAERILALAR---EAHDDGVALAVFPELSLSGYSCGDLFLQDALLDAVEDALAALVE   83 (678)
T ss_pred             CCEEEEEEECCCCCCC---CHHHHHHHHHHHHH---HHHHCCCCEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf             7712799947898753---88999999999999---99988998998255203389889985799999999999999998


Q ss_pred             ---C-CCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHH--CCCCCCCCCCCC
Q ss_conf             ---7-9824201100123455751210000367321221112563342213310010000121110--012222101358
Q gi|254780425|r  312 ---I-NQLLIVGSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHLVPFAEYLPYRNILKKLNLD--FYMFPLDYSSSD  385 (518)
Q Consensus       312 ---~-~~~li~G~~~~~~~~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVPFGEyiP~~~~~~~l~~~--~~~~~~~~~~g~  385 (518)
T Consensus        84 ~t~~~~~~viVG~P~~~----~~~LyN~A~vi-~~G~Ilg~~~K~~LPNY~vFdE~R~F~~g~~~~~~~i~~~g~~vPfG  158 (678)
T PRK02628         84 ASADLDPVLVVGAPLRV----RHRLYNCAVVI-HRGRILGVVPKSYLPNYREFYEKRWFAPGDGIRGETIRLCGQEVPFG  158 (678)
T ss_pred             HCCCCCEEEEEECEEEC----CCCEEEEEEEE-ECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
T ss_conf             57898859999330620----89548899999-99999999704338799765746367777778861683478220456


Q ss_pred             CCCCEE--ECCCCEEECCCCHHHHHHH---HHHCCCCCCEEEEECCCCC-CCCCHHHHHHHHHHHHHHHCCCEEEEEEC-
Q ss_conf             776200--0122001022216665588---8851269977999627755-76762899999999999972991999855-
Q gi|254780425|r  386 ISPLLG--LSEKLRLYPLLFSDALFHQ---DINNLENVSAILNIIDDSG-FMGSGTDHSFRYAQIQAVEIGLPLIRATN-  458 (518)
Q Consensus       386 ~~~~~~--~~~~~~~~~~ICyE~~f~~---~~r~~~~a~~lvn~tNd~W-f~~s~~~qH~~~a~~RAiE~~r~~vra~n-  458 (518)
T Consensus       159 ~dllF~~~~~~g~~~GveICEDlW~~~~P~~~la~~GA~lI~NlSASp~~~gK~~--~R~~lv~~~s~~~~~~yvY~n~G  236 (678)
T PRK02628        159 TDLLFEAEDLPGFVFGVEICEDLWVPIPPSSYAALAGATVLANLSASNITVGKAD--YRRLLVASQSARCLAAYVYAAAG  236 (678)
T ss_pred             CCEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCEEEECCCCHHHCCCHH--HHHHHHHHHHHHHCCCEEEEECC
T ss_conf             6525654166883899997211488998589998749887971688803348699--99999999988628856998235


Q ss_pred             C----------CCCEEECCCCEEEEECCCCCCE--EEEEEE
Q ss_conf             9----------7046998998087773899827--999996
Q gi|254780425|r  459 N----------GVSAFLDERGQIISSVYADRGA--SIDMHF  487 (518)
Q Consensus       459 t----------GiS~~id~~G~i~~~~~~~~~~--~l~~~v  487 (518)
T Consensus       237 ~gEsttDlVFdG~s-~I~~nG~lla~~~~F~~~~~l~~adi  276 (678)
T PRK02628        237 VGESTTDLAWDGQT-LIYENGELLAESERFPREEQLIIADI  276 (678)
T ss_pred             CCCCCCCEEEECCE-EEECCCCEEEECCCCCCCCCEEEEEE
T ss_conf             78767606996886-78728816753356666763689983