HHsearch alignment for GI: 254780425 and conserved domain: PRK02628
>PRK02628 nadE NAD synthetase; Reviewed.
Probab=99.59 E-value=1.2e-13 Score=107.33 Aligned_cols=234 Identities=15% Similarity=0.114 Sum_probs=136.5
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCH----HHHHHHH----HHHHHHHC
Q ss_conf 555321001244203555433335789987543101334668618983121011000----1123466----77656410
Q gi|254780425|r 240 KISPVIRIVQPGINPAIKEDREKILERYLSLTALPVSAGELEPVIIVWAYLPFPFSI----VDQPSIL----KKIASVLK 311 (518)
Q Consensus 240 ~~~~~V~iVQpni~~~~k~~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~~~----~~~~~~~----~~l~~~~~ 311 (518)
T Consensus 10 ~gfirvA~a~~~~~Vg---D~~~N~~~I~~~i~---~A~~~ga~lvvfPEL~ltGY~~eDL~l~~~fl~~~~~aL~~l~~ 83 (678)
T PRK02628 10 HGFVRVAAATPKVRVA---DPAFNAERILALAR---EAHDDGVALAVFPELSLSGYSCGDLFLQDALLDAVEDALAALVE 83 (678)
T ss_pred CCEEEEEEECCCCCCC---CHHHHHHHHHHHHH---HHHHCCCCEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 7712799947898753---88999999999999---99988998998255203389889985799999999999999998
Q ss_pred ---C-CCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHH--CCCCCCCCCCCC
Q ss_conf ---7-9824201100123455751210000367321221112563342213310010000121110--012222101358
Q gi|254780425|r 312 ---I-NQLLIVGSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHLVPFAEYLPYRNILKKLNLD--FYMFPLDYSSSD 385 (518)
Q Consensus 312 ---~-~~~li~G~~~~~~~~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVPFGEyiP~~~~~~~l~~~--~~~~~~~~~~g~ 385 (518)
T Consensus 84 ~t~~~~~~viVG~P~~~----~~~LyN~A~vi-~~G~Ilg~~~K~~LPNY~vFdE~R~F~~g~~~~~~~i~~~g~~vPfG 158 (678)
T PRK02628 84 ASADLDPVLVVGAPLRV----RHRLYNCAVVI-HRGRILGVVPKSYLPNYREFYEKRWFAPGDGIRGETIRLCGQEVPFG 158 (678)
T ss_pred HCCCCCEEEEEECEEEC----CCCEEEEEEEE-ECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
T ss_conf 57898859999330620----89548899999-99999999704338799765746367777778861683478220456
Q ss_pred CCCCEE--ECCCCEEECCCCHHHHHHH---HHHCCCCCCEEEEECCCCC-CCCCHHHHHHHHHHHHHHHCCCEEEEEEC-
Q ss_conf 776200--0122001022216665588---8851269977999627755-76762899999999999972991999855-
Q gi|254780425|r 386 ISPLLG--LSEKLRLYPLLFSDALFHQ---DINNLENVSAILNIIDDSG-FMGSGTDHSFRYAQIQAVEIGLPLIRATN- 458 (518)
Q Consensus 386 ~~~~~~--~~~~~~~~~~ICyE~~f~~---~~r~~~~a~~lvn~tNd~W-f~~s~~~qH~~~a~~RAiE~~r~~vra~n- 458 (518)
T Consensus 159 ~dllF~~~~~~g~~~GveICEDlW~~~~P~~~la~~GA~lI~NlSASp~~~gK~~--~R~~lv~~~s~~~~~~yvY~n~G 236 (678)
T PRK02628 159 TDLLFEAEDLPGFVFGVEICEDLWVPIPPSSYAALAGATVLANLSASNITVGKAD--YRRLLVASQSARCLAAYVYAAAG 236 (678)
T ss_pred CCEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCEEEECCCCHHHCCCHH--HHHHHHHHHHHHHCCCEEEEECC
T ss_conf 6525654166883899997211488998589998749887971688803348699--99999999988628856998235
Q ss_pred C----------CCCEEECCCCEEEEECCCCCCE--EEEEEE
Q ss_conf 9----------7046998998087773899827--999996
Q gi|254780425|r 459 N----------GVSAFLDERGQIISSVYADRGA--SIDMHF 487 (518)
Q Consensus 459 t----------GiS~~id~~G~i~~~~~~~~~~--~l~~~v 487 (518)
T Consensus 237 ~gEsttDlVFdG~s-~I~~nG~lla~~~~F~~~~~l~~adi 276 (678)
T PRK02628 237 VGESTTDLAWDGQT-LIYENGELLAESERFPREEQLIIADI 276 (678)
T ss_pred CCCCCCCEEEECCE-EEECCCCEEEECCCCCCCCCEEEEEE
T ss_conf 78767606996886-78728816753356666763689983