HHsearch alignment for GI: 254780425 and conserved domain: cd07569
>cd07569 DCase N-carbamyl-D-amino acid amidohydrolase (DCase, class 6 nitrilases). DCase hydrolyses N-carbamyl-D-amino acids to produce D-amino acids. It is an important biocatalyst in the pharmaceutical industry, producing useful D-amino acids for example in the preparation of beta-lactam antibiotics. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 6. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. Agrobacterium radiobacter DCase forms a tetramer (dimer of dimers). Some DCases may form trimers.
Probab=99.95 E-value=1.9e-26 Score=190.87 Aligned_cols=238 Identities=15% Similarity=0.113 Sum_probs=160.7
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC----CH-HHH------------HHHH
Q ss_conf 553210012442035554333357899875431013346686189831210110----00-112------------3466
Q gi|254780425|r 241 ISPVIRIVQPGINPAIKEDREKILERYLSLTALPVSAGELEPVIIVWAYLPFPF----SI-VDQ------------PSIL 303 (518)
Q Consensus 241 ~~~~V~iVQpni~~~~k~~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~----~~-~~~------------~~~~ 303 (518)
T Consensus 2 ~~~rvA~~Q~~p~~~-~~~~e~nl~k~~~~i~---~Aa~~GA~LvvfPE~~~tgy~p~~~~~~~~~~~~~~e~~~~gp~~ 77 (302)
T cd07569 2 RQVILAAAQMGPIAR-AETRESVVARLIALLE---EAASRGAQLVVFPELALTTFFPRWYFPDEAELDSFFETEMPNPET 77 (302)
T ss_pred CEEEEEEEEEECCCC-CCCHHHHHHHHHHHHH---HHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH
T ss_conf 278999990026778-6459999999999999---999880999987899766887443458999999766431899899
Q ss_pred HHHHHHHCCCCEEEE-CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHCCCCCCCCC
Q ss_conf 776564107982420-1100123455751210000367321221112563342213310010000121110012222101
Q gi|254780425|r 304 KKIASVLKINQLLIV-GSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHLVPFAEYLPYRNILKKLNLDFYMFPLDYS 382 (518)
Q Consensus 304 ~~l~~~~~~~~~li~-G~~~~~~~~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVPFGEyiP~~~~~~~l~~~~~~~~~~~~ 382 (518)
T Consensus 78 ~~l~~~A~~~~i~v~~G~~e~~~~~~~~~~yNt~~~i~~~G~il~~yrK~HLp~~~~~~~~~~~~-------~~E~~~f~ 150 (302)
T cd07569 78 QPLFDRAKELGIGFYLGYAELTEDGGVKRRFNTSILVDKSGKIVGKYRKVHLPGHKEPEPYRPFQ-------HLEKRYFE 150 (302)
T ss_pred HHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCC-------CCEEEEEC
T ss_conf 99999999849899965641345567864277899998998499888701178865545787644-------33146765
Q ss_pred CCCCCCCEEECCCCEEECCCCHHHHHHHHHHCC--CCCCEEEEECCC-----CCCCCC-HHHHH-HHHHHHHHHHCCCEE
Q ss_conf 358776200012200102221666558888512--699779996277-----557676-28999-999999999729919
Q gi|254780425|r 383 SSDISPLLGLSEKLRLYPLLFSDALFHQDINNL--ENVSAILNIIDD-----SGFMGS-GTDHS-FRYAQIQAVEIGLPL 453 (518)
Q Consensus 383 ~g~~~~~~~~~~~~~~~~~ICyE~~f~~~~r~~--~~a~~lvn~tNd-----~Wf~~s-~~~qH-~~~a~~RAiE~~r~~ 453 (518)
T Consensus 151 ~Gd~~~~V~~t~~griG~~ICyD~~fPE~~r~la~~GA~li~~~~~~p~~~~~~~~~~~~~~~~~~l~~~arA~en~~~v 230 (302)
T cd07569 151 PGDLGFPVFRVPGGIMGMCICNDRRWPETWRVMGLQGVELVLLGYNTPTHNPPAPEHDHLRLFHNLLSMQAGAYQNGTWV 230 (302)
T ss_pred CCCCCCEEEEECCEEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 89876404763883799986046567499999997799599962677666888664356789999999863255347717
Q ss_pred EEEECC---------CCCEEECCCCEEEEECCCCCCEEEEEEECC
Q ss_conf 998559---------704699899808777389982799999606
Q gi|254780425|r 454 IRATNN---------GVSAFLDERGQIISSVYADRGASIDMHFQP 489 (518)
Q Consensus 454 vra~nt---------GiS~~id~~G~i~~~~~~~~~~~l~~~v~~ 489 (518)
T Consensus 231 v~~n~~G~~~~~~~~G~S~Ii~P~G~vlaea~~~~e~ll~AdlDl 275 (302)
T cd07569 231 VAAAKAGMEDGCDLIGGSCIVAPTGEIVAQATTLEDEVIVADCDL 275 (302)
T ss_pred EECCCCCCCCCCEEECCCEEECCCCCEEEECCCCCCEEEEEEECH
T ss_conf 850456677897376341899899998760488998699999569