>cd07579 nitrilase_1_R2 Second nitrilase domain of an uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). Members of this subgroup have two nitrilase domains. This is the second of those two domains. The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.

Probab=99.92 E-value=6.6e-24 Score=174.23 Aligned_cols=215 Identities=17% Similarity=0.152 Sum_probs=148.9 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHH-------HHHHHHHHHHHHHCCCCEE Q ss_conf 210012442035554333357899875431013346686189831210110001-------1234667765641079824 Q gi|254780425|r 244 VIRIVQPGINPAIKEDREKILERYLSLTALPVSAGELEPVIIVWAYLPFPFSIV-------DQPSILKKIASVLKINQLL 316 (518) Q Consensus 244 ~V~iVQpni~~~~k~~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~~~~-------~~~~~~~~l~~~~~~~~~l 316 (518) T Consensus 1 rvA~~Q~~~~~----d~~~Nl~~~~~~i~---~Aa~~ga~lvvlPE~~~tg~~~~~~~a~~~~g~~~~~l~~lA~~~~i~ 73 (279) T cd07579 1 RIAVAQFAPTP----DIAGNLATIDRLAA---EAKATGAELVVFPELALTGLDDPASEAESDTGPAVSALRRLARRLRLY 73 (279) T ss_pred CEEEEECCCCC----CHHHHHHHHHHHHH---HHHHCCCEEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCEE T ss_conf 99999465899----99999999999999---999879959997999411599547743559988999999999975919 Q ss_pred EECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCC Q ss_conf 20110012345575121000036732122111256334221331001000012111001222210135877620001220 Q gi|254780425|r 317 IVGSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHLVPFAEYLPYRNILKKLNLDFYMFPLDYSSSDISPLLGLSEKL 396 (518) Q Consensus 317 i~G~~~~~~~~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVPFGEyiP~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~ 396 (518) T Consensus 74 iv~G~~e~---~~~~~yNs~~~i~~~G-~i~~YrK~HL--~~~-----------------E~~~~~~G~~~~v~~t-~~g 129 (279) T cd07579 74 LVAGFAEA---DGDGLYNSAVLVGPEG-LVGTYRKTHL--IEP-----------------ERSWATPGDTWPVYDL-PLG 129 (279) T ss_pred EEEEEEEC---CCCEEEEEEEEECCCC-CEEEEEECCC--CCC-----------------CCEEECCCCCCEEEEE-CCE T ss_conf 99989994---5993788899985997-6789970258--975-----------------4411338980559998-998 Q ss_pred EEECCCCHHHHHHHHHHCC--CCCCEEEEECCCCC--------------CC-CCHH-HHHHHHHHHHHHHCCCEEEEEE- Q ss_conf 0102221666558888512--69977999627755--------------76-7628-9999999999997299199985- Q gi|254780425|r 397 RLYPLLFSDALFHQDINNL--ENVSAILNIIDDSG--------------FM-GSGT-DHSFRYAQIQAVEIGLPLIRAT- 457 (518) Q Consensus 397 ~~~~~ICyE~~f~~~~r~~--~~a~~lvn~tNd~W--------------f~-~s~~-~qH~~~a~~RAiE~~r~~vra~- 457 (518) T Consensus 130 riGl~ICyD~rFPE~~R~la~~GA~il~~PaA~~~~~~~~~~~~~~~~~~~~~~g~~~~hw~llraRAieN~~~v~~an~ 209 (279) T cd07579 130 RVGLLIGHDALFPEAGRVLALRGCDLLACPAAIAIPFVGAHAGTSVPQPYPIPTGADPTHWHLARVRAGENNVYFAFANV 209 (279) T ss_pred EEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECC T ss_conf 89988880201289999999879939997663466755333453233455544465347999999888646759999435 Q ss_pred ------CCCCCEEECCCCEEEE---ECCCCCCEEEEEEECC Q ss_conf ------5970469989980877---7389982799999606 Q gi|254780425|r 458 ------NNGVSAFLDERGQIIS---SVYADRGASIDMHFQP 489 (518) Q Consensus 458 ------ntGiS~~id~~G~i~~---~~~~~~~~~l~~~v~~ 489 (518) T Consensus 210 ~~~~~~~~G~s~i~gp~~~~~p~~~~~~~~~egi~~A~iDl 250 (279) T cd07579 210 PDPARGYTGWSGVFGPDTFAFPRQEAAIGDEEGIAWALIDT 250 (279) T ss_pred CCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCEEEEEECH T ss_conf 46767866346999657554353135038877279999758

HHsearch alignment for GI: 254780425 and conserved domain: cd07579