HHsearch alignment of GI: 254780425 and MMDB domain: 1uf5_A_
>1uf5_A (A:) N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP}
Probab=100.00 E-value=2.1e-37 Score=261.78 Aligned_cols=252 Identities=13% Similarity=0.120 Sum_probs=202.8
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHH-----------------HHHHH
Q ss_conf 5532100124420355543333578998754310133466861898312101100011-----------------23466
Q gi|254780425|r 241 ISPVIRIVQPGINPAIKEDREKILERYLSLTALPVSAGELEPVIIVWAYLPFPFSIVD-----------------QPSIL 303 (518)
Q Consensus 241 ~~~~V~iVQpni~~~~k~~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~~~~~-----------------~~~~~ 303 (518)
.+++|+++|+|+++..++ .++..++..++.+ ++.+.++|+||+||.+++-+..+ .....
T Consensus 2 ~~~kIa~~Q~~~~~~~~d-~~~n~~~i~~~~~---~A~~~gadlvvfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (303)
T 1uf5_A 2 RQMILAVGQQGPIARAET-REQVVVRLLDMLT---KAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVV 77 (303)
T ss_dssp CEEEEEEEEBCCCCTTCC-HHHHHHHHHHHHH---HHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSSSCTTT
T ss_pred CEEEEEEECCCCCCCCCC-HHHHHHHHHHHHH---HHHHCCCCEEECCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCHHH
T ss_conf 479999992678689858-9999999999999---999888939990888634587200003666776666552488899
Q ss_pred HHHHHHHCC-CCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHCCCCCCCCC
Q ss_conf 776564107-9824201100123455751210000367321221112563342213310010000121110012222101
Q gi|254780425|r 304 KKIASVLKI-NQLLIVGSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHLVPFAEYLPYRNILKKLNLDFYMFPLDYS 382 (518)
Q Consensus 304 ~~l~~~~~~-~~~li~G~~~~~~~~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVPFGEyiP~~~~~~~l~~~~~~~~~~~~ 382 (518)
+.+.+.+++ +..++.|....+....+.++||++++++++|++..+|.|+++.+++|+.|.+.....- ...+.
T Consensus 78 ~~~~~~a~~~~~~iv~G~~~~~~~~~~~~~yN~~~~~~~~g~~~~~~kk~~~~~~~~~~~~~~~~~~~-------~~~~~ 150 (303)
T 1uf5_A 78 RPLFEKAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLE-------KRYFE 150 (303)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEEETTEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTCSSCCCH-------HHHCC
T ss_pred HHHHHHHHHCCCEEEEEEEEEEEECCCCEEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCEEC-------CEEEE
T ss_conf 99999999749469887544223148971588999605653122103652479986554343110102-------11573
Q ss_pred CCCCCCCEEECCCCEEECCCCHHHHHHHHHHCC--CCCCEEEEECC------CCCCCCC-HHHHHHHHHHHHHHHCCCEE
Q ss_conf 358776200012200102221666558888512--69977999627------7557676-28999999999999729919
Q gi|254780425|r 383 SSDISPLLGLSEKLRLYPLLFSDALFHQDINNL--ENVSAILNIID------DSGFMGS-GTDHSFRYAQIQAVEIGLPL 453 (518)
Q Consensus 383 ~g~~~~~~~~~~~~~~~~~ICyE~~f~~~~r~~--~~a~~lvn~tN------d~Wf~~s-~~~qH~~~a~~RAiE~~r~~ 453 (518)
+++........++.|+|.+||||..||+..|.+ +|+++++++++ |+|+..+ ++.||..+++.||+||++++
T Consensus 151 ~~~~~~~v~~~~~~kig~~IC~D~~~p~~~~~~~~~gadlii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~rA~e~~~~~ 230 (303)
T 1uf5_A 151 PGDLGFPVYDVDAAKMGMFIANDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWS 230 (303)
T ss_dssp CCSSCSCEEEETTEEEEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHTCEE
T ss_pred ECCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 06876505884583687602213101576666762898899970455654544421001100124666666655245303
Q ss_pred EEEECC---------CCCEEECCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 998559---------70469989980877738998279999960676876878655689
Q gi|254780425|r 454 IRATNN---------GVSAFLDERGQIISSVYADRGASIDMHFQPKVRDSFRSSIQMRV 503 (518)
Q Consensus 454 vra~nt---------GiS~~id~~G~i~~~~~~~~~~~l~~~v~~~~~~T~y~~~g~~~ 503 (518)
++++++ |.|++|||+|+++++++.++++++.+++++....|.|+++++|.
T Consensus 231 v~an~~g~~~~~~~~G~S~vi~p~G~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 289 (303)
T 1uf5_A 231 AAAGKAGMEENCMLLGHSCIVAPTGEIVALTTTLEDEVITAAVDLDRCRELREHIFNFK 289 (303)
T ss_dssp EEEEBCEEETTEEECCCCEEECTTSCEEEECCSSSSEEEEEEEEGGGGHHHHTTTTCHH
T ss_pred EECCCCCCCCCCEECCCCEEEECCCCEEEECCCCCCEEEEEEECHHHHHHHHHHCCCHH
T ss_conf 31364121336207367489959999998768998879999985899999997588513