HHsearch alignment of GI: 254780425 and MMDB domain: 2dyu_A_1-283
>2dyu_A (A:1-283) Formamidase; AMIF, CEK, catalytic triad, aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori 26695} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=100.00 E-value=2.1e-37 Score=261.80 Aligned_cols=244 Identities=13% Similarity=0.037 Sum_probs=195.4
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHH-----------HHHH
Q ss_conf 66555553210012442035554-33335789987543101334668618983121011000112-----------3466
Q gi|254780425|r 236 LKFEKISPVIRIVQPGINPAIKE-DREKILERYLSLTALPVSAGELEPVIIVWAYLPFPFSIVDQ-----------PSIL 303 (518)
Q Consensus 236 ~~~~~~~~~V~iVQpni~~~~k~-~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~~~~~~-----------~~~~ 303 (518)
......+++|+++|+|+++..++ +.++..+++.++.+.. ++.+.++|||||||.+++.+..+. ....
T Consensus 7 ~~~~~~~~kVa~vQ~~~~~~~~~~d~~~n~~~~~~~i~~~-~A~~~g~dlivfPE~~l~g~~~~~~~~~~~~~~~~~~~~ 85 (283)
T 2dyu_A 7 MGKPIEGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHAT-KAGYPGVELIIFPEYSTQGLNTAKWLSEEFLLDVPGKET 85 (283)
T ss_dssp ------CEEEEEECCBCCCCCSHHHHHHHHHHHHHHHHHH-HHHCTTEEEEECCTTTTTCCCTTTTTSGGGCBCSSSHHH
T ss_pred CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHH
T ss_conf 8887754389999678777888889999999999999998-615699979997887644688336666888775787799
Q ss_pred HHHHHHHCCCCE-EEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHCCCCCCCCC
Q ss_conf 776564107982-4201100123455751210000367321221112563342213310010000121110012222101
Q gi|254780425|r 304 KKIASVLKINQL-LIVGSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHLVPFAEYLPYRNILKKLNLDFYMFPLDYS 382 (518)
Q Consensus 304 ~~l~~~~~~~~~-li~G~~~~~~~~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVPFGEyiP~~~~~~~l~~~~~~~~~~~~ 382 (518)
+.+.+.+++++. +++|....+ ..++.++||++++++|+|++..+|.|+||+++.|+.++.
T Consensus 86 ~~l~~~a~~~~~~ii~g~~~~~-~~~~~~~yNs~~~~~~~g~~~~~~~k~~~~~~~~~~~~~------------------ 146 (283)
T 2dyu_A 86 ELYAKACKEAKVYGVFSIMERN-PDSNKNPYNTAIIIDPQGEIILKYRKLFPWNPIEPWYPG------------------ 146 (283)
T ss_dssp HHHHHHHHHHTCEEEEEEEECC-SSTTSCCEEEEEEECTTSCEEEEEECSSCCTTTCCCCCC------------------
T ss_pred HHHHHHHHHCCCEEEEEEEEEC-CCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCC------------------
T ss_conf 9999999745818998777850-456980687765303465321022340257631011012------------------
Q ss_pred CCCCCCCEEECCCCEEECCCCHHHHHHHHHHCC--CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 358776200012200102221666558888512--699779996277557676289999999999997299199985597
Q gi|254780425|r 383 SSDISPLLGLSEKLRLYPLLFSDALFHQDINNL--ENVSAILNIIDDSGFMGSGTDHSFRYAQIQAVEIGLPLIRATNNG 460 (518)
Q Consensus 383 ~g~~~~~~~~~~~~~~~~~ICyE~~f~~~~r~~--~~a~~lvn~tNd~Wf~~s~~~qH~~~a~~RAiE~~r~~vra~ntG 460 (518)
+.........++.+++.+||||..||+..|.+ +|+++++|++++.. ..+.||..+++.||+||+.++++|+++|
T Consensus 147 -~~~~~~~~~~~~~~ig~~IC~d~~~pe~~r~~~~~g~~ll~~p~~~~~---~~~~~~~~~~~~~A~e~~~~vv~an~~G 222 (283)
T 2dyu_A 147 -DLGMPVCEGPGGSKLAVCICHDGMIPELAREAAYKGCNVYIRISGYST---QVNDQWILTNRSNAWHNLMYTVSVNLAG 222 (283)
T ss_dssp -CSCCCCEECGGGCEEEEEEGGGGGCHHHHHHHHHTTCSEEEEEESSCT---TSHHHHHHHHHHHHHHHTCEEEEEECSB
T ss_pred -CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC---CCCHHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf -466420002588579999703532025678887630333101334576---5302345588999997698499983541
Q ss_pred ---------CCEEECCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf ---------0469989980877738998279999960676876878655689
Q gi|254780425|r 461 ---------VSAFLDERGQIISSVYADRGASIDMHFQPKVRDSFRSSIQMRV 503 (518)
Q Consensus 461 ---------iS~~id~~G~i~~~~~~~~~~~l~~~v~~~~~~T~y~~~g~~~ 503 (518)
.|++|||+|+++++++.++++++..++.+...+|.|+++|+|.
T Consensus 223 ~~~~~~~~G~S~ii~p~G~~l~~~~~~~~~~l~~~idl~~~~~~~~~~~~~~ 274 (283)
T 2dyu_A 223 YDNVFYYFGEGQICNFDGTTLVQGHRNPWEIVTGEIYPKMADNARLSWGLEN 274 (283)
T ss_dssp SSSSCCCCCEEEEECTTSCEEEECCCCTTCEEEEEECHHHHHHHHHHCSTTC
T ss_pred CCCCEEEEEEEEEECCCCCEEEECCCCCCEEEEEEECHHHHHHHHHCCCHHH
T ss_conf 3798589721489939968676328998424899975999999997231331