HHsearch alignment of GI: 254780425 and MMDB domain: 3ilv_A_1-273
>3ilv_A (A:1-273) Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=99.97 E-value=6.7e-31 Score=219.40 Aligned_cols=242 Identities=10% Similarity=-0.017 Sum_probs=176.8
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHH--------HHHHHHHHHHHHCC
Q ss_conf 5532100124420355543333578998754310133466861898312101100011--------23466776564107
Q gi|254780425|r 241 ISPVIRIVQPGINPAIKEDREKILERYLSLTALPVSAGELEPVIIVWAYLPFPFSIVD--------QPSILKKIASVLKI 312 (518)
Q Consensus 241 ~~~~V~iVQpni~~~~k~~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~~~~~--------~~~~~~~l~~~~~~ 312 (518)
++++|+++|+|+++.++. ...++..++.+ ++.+.++|||||||.+++.+... .....+.+.+.+++
T Consensus 4 ~~~rva~~Q~~~~~~d~~---~n~~~i~~~i~---~A~~~gadlvvfPE~~l~g~~~~~~~~~~~~~~~~~~~l~~~a~~ 77 (273)
T 3ilv_A 4 STIRIGGAAVNQTPIDWE---NNVKNILDAIE---EAKNANVEILCLPELCITGYGCEDLFLTDWVAETAIEYCFEIAAS 77 (273)
T ss_dssp CEEEEEEEEECCCTTCHH---HHHHHHHHHHH---HHHHTTCSEEECCTTTTTCSCCGGGGGSHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEEECCCCCCCHH---HHHHHHHHHHH---HHHHCCCCEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 760899996789867699---99999999999---999889969997888312699778730888999999999999986
Q ss_pred CC-EEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHCCCCCC-CCCCCCCCCCE
Q ss_conf 98-24201100123455751210000367321221112563342213310010000121110012222-10135877620
Q gi|254780425|r 313 NQ-LLIVGSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHLVPFAEYLPYRNILKKLNLDFYMFPL-DYSSSDISPLL 390 (518)
Q Consensus 313 ~~-~li~G~~~~~~~~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVPFGEyiP~~~~~~~l~~~~~~~~~-~~~~g~~~~~~ 390 (518)
+. .++.|..... +.+.||++++++++|++...|+|+|+++++|+.|...+.++.......... .+.+|...+++
T Consensus 78 ~~~~i~~g~~~~~----~~~~~~~~~~v~~~G~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~ 153 (273)
T 3ilv_A 78 CTDITVSLGLPXR----IAGITYNCVCLVENGIVKGFSAKQFLANEGVHYETRWFTAWPRNHTTTFLYNDVKYPFGDVLY 153 (273)
T ss_dssp CTTSEEEEEEEEE----ETTEEEEEEEEEETTEEEEEEECSSCCCSTTCCGGGTCCCCCTTCEEEEEETTEEEEEESCCE
T ss_pred CCCCEEEEEEEEE----ECCEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCEEE
T ss_conf 6998899968997----799289999999899999997576289998745441025556777417834875578776589
Q ss_pred EECCCCEEECCCCHHHHHHHHHHCC-CCCCEEEEECCCCCCCCC-HHHHHHHHHHHHHHHCCCEEEEEECCCC-------
Q ss_conf 0012200102221666558888512-699779996277557676-2899999999999972991999855970-------
Q gi|254780425|r 391 GLSEKLRLYPLLFSDALFHQDINNL-ENVSAILNIIDDSGFMGS-GTDHSFRYAQIQAVEIGLPLIRATNNGV------- 461 (518)
Q Consensus 391 ~~~~~~~~~~~ICyE~~f~~~~r~~-~~a~~lvn~tNd~Wf~~s-~~~qH~~~a~~RAiE~~r~~vra~ntGi------- 461 (518)
. .++.+++.+||||..||+..+.. ...+..+.+++++|+..+ ...||..++|.||+||++++++++++|.
T Consensus 154 ~-~~~~~~g~~IC~d~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~a~e~~~~vv~an~~G~~~~~~~~ 232 (273)
T 3ilv_A 154 N-VKDARIGFEICEDAWRTDRVGIRHYEKGATLVLNPSASHFAFGKSAIRYDLVIGGSERFDCTYVYANLLGNEAGRXIY 232 (273)
T ss_dssp E-ETTEEEEECCTTC----------CGGGTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHTTSEEEEEECEEESSSSCEE
T ss_pred E-ECCEEEEEEECCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEC
T ss_conf 8-789168876346544364677776650322102665444321257888888887653102214521456767664041
Q ss_pred --CEEECCCCEEEEECCC---CCCEEEEEEECCCCCC
Q ss_conf --4699899808777389---9827999996067687
Q gi|254780425|r 462 --SAFLDERGQIISSVYA---DRGASIDMHFQPKVRD 493 (518)
Q Consensus 462 --S~~id~~G~i~~~~~~---~~~~~l~~~v~~~~~~ 493 (518)
|++|||+|+++++.+. .+++++..++.+..-.
T Consensus 233 G~S~ii~p~G~~~~~~~~~~~~~e~i~~a~idl~~~~ 269 (273)
T 3ilv_A 233 DGEVLIAHKGKLIQRNDRLSFKNVNLIYADIATDSAE 269 (273)
T ss_dssp ECCEEEEETTEEEEECCSSCSSSEEEEEEEEEC----
T ss_pred CCCEEEECCCHHHHHCCCCCEEEEEEEEEEECCCCCC
T ss_conf 9946995897087635666411257899750365544