HHsearch results for GI: 254780425 and protein with PDBid: 1uf5_A
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=100.00 E-value=3.3e-34 Score=239.99 Aligned_cols=243 Identities=14% Similarity=0.148 Sum_probs=178.6
Q ss_pred CCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHH-----------------HHHH
Q ss_conf 55321001244-20355543333578998754310133466861898312101100011-----------------2346
Q gi|254780425|r 241 ISPVIRIVQPG-INPAIKEDREKILERYLSLTALPVSAGELEPVIIVWAYLPFPFSIVD-----------------QPSI 302 (518)
Q Consensus 241 ~~~~V~iVQpn-i~~~~k~~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~~~~~-----------------~~~~ 302 (518)
.+++|++.|.+ +... .+++..++++.++.+. +.+.++|||||||.+++-+... ....
T Consensus 2 ~~~~ia~~Q~~pi~~~--~~~~~~l~r~~~li~~---A~~~gadlvvfPE~~ltGy~~~~~~~~~~~~~~~~~~~~~~~~ 76 (303)
T 1uf5_A 2 RQMILAVGQQGPIARA--ETREQVVVRLLDMLTK---AASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPV 76 (303)
T ss_dssp CEEEEEEEEBCCCCTT--CCHHHHHHHHHHHHHH---HHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSSSCTT
T ss_pred CEEEEEEECCCCCCCC--CCHHHHHHHHHHHHHH---HHHCCCCEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCHH
T ss_conf 5799999846786898--6899999999999999---9988794999588951358702210387777666655058889
Q ss_pred HHHHHHHHCC-CCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHCCCCCCCC
Q ss_conf 6776564107-982420110012345575121000036732122111256334221331001000012111001222210
Q gi|254780425|r 303 LKKIASVLKI-NQLLIVGSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHLVPFAEYLPYRNILKKLNLDFYMFPLDY 381 (518)
Q Consensus 303 ~~~l~~~~~~-~~~li~G~~~~~~~~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVPFGEyiP~~~~~~~l~~~~~~~~~~~ 381 (518)
.+.+.+.+++ +..+++|........++.++|||+++++++|+++.+|+|+||+|++||.|++.+...-. ..+
T Consensus 77 ~~~l~~~A~~~~i~v~~G~~~~~~~~~~~~~yNsa~~i~~~G~i~~~y~K~~L~~~~e~~~~~~~~~~e~-------~~~ 149 (303)
T 1uf5_A 77 VRPLFEKAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEK-------RYF 149 (303)
T ss_dssp THHHHHHHHHHTCEEEEEEEEEEEETTEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTCSSCCCHH-------HHC
T ss_pred HHHHHHHHHHCCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEE-------EEE
T ss_conf 9999999997597799853357650789808999999848986888762012799765434566320001-------256
Q ss_pred CCCCCCCCEEECCCCEEECCCCHHHHHHHHHHCC--CCCCEEEEECCCCCC-CC-----C-HHHHHHHHHHHHHHHCCCE
Q ss_conf 1358776200012200102221666558888512--699779996277557-67-----6-2899999999999972991
Q gi|254780425|r 382 SSSDISPLLGLSEKLRLYPLLFSDALFHQDINNL--ENVSAILNIIDDSGF-MG-----S-GTDHSFRYAQIQAVEIGLP 452 (518)
Q Consensus 382 ~~g~~~~~~~~~~~~~~~~~ICyE~~f~~~~r~~--~~a~~lvn~tNd~Wf-~~-----s-~~~qH~~~a~~RAiE~~r~ 452 (518)
.+++........++.++|.+||||..||+..|.+ +||+++++++|..+. .. . ...+|...+|.||+||+.+
T Consensus 150 ~~~~~~~~~~~~~~~~ig~~IC~D~~~pe~~r~la~~Ga~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~arA~en~~~ 229 (303)
T 1uf5_A 150 EPGDLGFPVYDVDAAKMGMFIANDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAW 229 (303)
T ss_dssp CCCSSCSCEEEETTEEEEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHTCE
T ss_pred ECCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE
T ss_conf 05887763799468478865434300669999999889929998157755456542200121002465677677455973
Q ss_pred EEEEECC---------CCCEEECCCCEEEEECCCCCCEEEEEEECCCCCCCH
Q ss_conf 9998559---------704699899808777389982799999606768768
Q gi|254780425|r 453 LIRATNN---------GVSAFLDERGQIISSVYADRGASIDMHFQPKVRDSF 495 (518)
Q Consensus 453 ~vra~nt---------GiS~~id~~G~i~~~~~~~~~~~l~~~v~~~~~~T~ 495 (518)
++++.++ |.|+++||+|+++++.+.++++++.+++.+..-...
T Consensus 230 vv~~n~~g~~~~~~~~G~S~I~~p~G~vla~~~~~~e~il~a~iDl~~~~~~ 281 (303)
T 1uf5_A 230 SAAAGKAGMEENCMLLGHSCIVAPTGEIVALTTTLEDEVITAAVDLDRCREL 281 (303)
T ss_dssp EEEEEBCEEETTEEECCCCEEECTTSCEEEECCSSSSEEEEEEEEGGGGHHH
T ss_pred EEEECCCCCCCCCEECCCCEEEECCCCEEEECCCCCCEEEEEEECHHHHHHH
T ss_conf 9996676877782263662999489999987689988899999858999999