HHsearch results for GI: 254780425 and protein with PDBid: 3n05_A
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=99.91 E-value=8.5e-24 Score=172.13 Aligned_cols=225 Identities=13% Similarity=0.155 Sum_probs=155.7
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHH----HHHH-------HHHHHHHH
Q ss_conf 553210012442035554333357899875431013346686189831210110001----1234-------66776564
Q gi|254780425|r 241 ISPVIRIVQPGINPAIKEDREKILERYLSLTALPVSAGELEPVIIVWAYLPFPFSIV----DQPS-------ILKKIASV 309 (518)
Q Consensus 241 ~~~~V~iVQpni~~~~k~~~~~~~~~~~~l~~~~~~~~~~~~dLiVWPEsa~p~~~~----~~~~-------~~~~l~~~ 309 (518)
..++|+++|.|.-.. |.+...++..++.+ ++.+.++||||+||.+++-+.- ..+. ..+.+.+.
T Consensus 3 ~~mKIAlaQ~n~~~G---D~~~N~~ki~~~i~---~A~~~GAdLvVfPEl~LtGY~~~Dl~~~~~f~~~~~~~l~~la~~ 76 (590)
T 3n05_A 3 LQLRLALNQIDSTVG---DIAGNAEAILRWTR---HSAEQGAHLVAFPEMALTGYPVEDLALRSSFVEASRTALRELAAR 76 (590)
T ss_dssp EEEEEEEEECCCCTT---CHHHHHHHHHHHHH---HHHTTTCSEEECCTTTTTCSCCGGGGGCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCC---CHHHHHHHHHHHHH---HHHHCCCCEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 657898997899867---69999999999999---999779959998888523588566630766899999999999999
Q ss_pred HC----CCCEEEECCCCCCCC------CCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHCCCCCC
Q ss_conf 10----798242011001234------55751210000367321221112563342213310010000121110012222
Q gi|254780425|r 310 LK----INQLLIVGSMRKELV------DGRSHFYKSIYIINSKGEILASSNAKHLVPFAEYLPYRNILKKLNLDFYMFPL 379 (518)
Q Consensus 310 ~~----~~~~li~G~~~~~~~------~~~~~~yNs~~~~~~~g~~~~~Y~K~~LVPFGEyiP~~~~~~~l~~~~~~~~~ 379 (518)
.. .+.++++|....... ..+.++||++++++ +|++..+|+|+||.+++++-.-+
T Consensus 77 ~~~~~~~~i~vivG~~~~~~~~~~~~~~~~g~lyNsa~vi~-~G~i~~~y~K~~Lp~~~~~~E~r--------------- 140 (590)
T 3n05_A 77 LAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHLPNYGVFDEFR--------------- 140 (590)
T ss_dssp HHHTTCTTSCEEEEEEEECSSCBTTTTBCTTCEEEEEEEEE-TTEEEEEEECCCCCSSSSCCHHH---------------
T ss_pred HHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEE-CCEEEEEEEEEECCCCCCCEEEE---------------
T ss_conf 76533588499996245036765444566782677999998-99799999635057874100454---------------
Q ss_pred CCCCCCCCCCEEECCCCEEECCCCHHHHHHHHH-HC--CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 101358776200012200102221666558888-51--269977999627755767628999999999999729919998
Q gi|254780425|r 380 DYSSSDISPLLGLSEKLRLYPLLFSDALFHQDI-NN--LENVSAILNIIDDSGFMGSGTDHSFRYAQIQAVEIGLPLIRA 456 (518)
Q Consensus 380 ~~~~g~~~~~~~~~~~~~~~~~ICyE~~f~~~~-r~--~~~a~~lvn~tNd~Wf~~s~~~qH~~~a~~RAiE~~r~~vra 456 (518)
.|.+|+..+++. .++.++|..||||..+|+.. +. ..+++++++++...+. .....++..+.+.||.|++.+++.+
T Consensus 141 ~f~~G~~~~v~~-~~g~riGv~IC~D~w~pe~~~~~l~~~ga~lii~~sas~~~-~~k~~~r~~~~~~ra~~~~~~vv~~ 218 (590)
T 3n05_A 141 YFVPGDTMPIVR-LHGVDIALAICEDLWQDGGRVPAARSAGAGLLLSVNASPYE-RDKDDTRLELVRKRAQEAGCTTAYL 218 (590)
T ss_dssp HCCCCCEEEEEE-ETTEEEEEEEGGGGGSTTSHHHHHHHTTCSEEEEEECCBCC-CCSSCHHHHHHHHHHHHHTSEEEEE
T ss_pred ECCCCCCCCEEE-ECCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCC-CCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 206998664145-36847740035133110568999985464544576621102-5738999999999998529853521
Q ss_pred EC---------CCCCEEECCCCEEEEECCCCCCEEEEEEECC
Q ss_conf 55---------9704699899808777389982799999606
Q gi|254780425|r 457 TN---------NGVSAFLDERGQIISSVYADRGASIDMHFQP 489 (518)
Q Consensus 457 ~n---------tGiS~~id~~G~i~~~~~~~~~~~l~~~v~~ 489 (518)
.. .|-|.+|||+|+++.+.+.++++++..++.+
T Consensus 219 N~vG~~~~~vf~G~S~Ii~p~G~ila~~~~f~E~i~~aDiDl 260 (590)
T 3n05_A 219 AMIGGQDELVFDGDSIVVDRDGEVVARAPQFSEGCVVLDLDL 260 (590)
T ss_dssp ECEEEETTEEEEBCCEEECTTSCEEEECCBTSCEEEEEEEEE
T ss_pred EECCCCCCEEEECCEEEEECCCCEEEECCCCCCCEEEEEEEH
T ss_conf 101577854876886899489978887567778548999751