PSIBLAST alignment of GI: 254780425 and protein with PDB id: 1ems

gi|9955180|pdb|1EMS|A Chain A, Crystal Structure Of The C. Elegans Nitfhit Protein Length = 440
>gi|9955181|pdb|1EMS|B Chain B, Crystal Structure Of The C. Elegans Nitfhit Protein Length = 440
 Score = 90.0 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 60/213 (28%), Gaps = 23/213 (10%)

Query: 295 SIVDQPSILKKIASVLKINQLLIVGSMRKELVDGRSHFYKSIYIINSKGEILASSNAKHL 354
              D   + K      K N  L +G +  +     +H + +  II+S G   A  N  HL
Sbjct: 71  MATDCEYMEKYRELARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHL 130

Query: 355 VPFAEYLPYRNILKKLNLDFYMFPLDYSSSDISPLLGLSEKLRLYPLLFSDALFHQDINN 414
                    R +  + +           +      L +   +R   L           N 
Sbjct: 131 FDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRFPELSLW--------NR 182

Query: 415 LENVSAILNIIDDSGFM-GSGTDHSFRYAQIQAVEIGLPLIRATNN----------GVSA 463
                 +      S F   +G  H     + +A+E    ++ A             G S 
Sbjct: 183 KRGAQLL---SFPSAFTLNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSM 239

Query: 464 FLDERGQIISSVYADRGASIDMHFQPKVRDSFR 496
            +D  G +++     R             D+ R
Sbjct: 240 VVDPWGAVVAQCSE-RVDMCFAEIDLSYVDTLR 271